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Aliases : kfl00006_0050_v1.1
Description : (at1g14310 : 237.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity, phosphoglycolate phosphatase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Haloacid dehydrogenase/epoxide hydrolase (InterPro:IPR005833), HAD-superfamily hydrolase, subfamily IA, REG-2-like (InterPro:IPR011949), HAD-superfamily hydrolase, subfamily IA, variant 1 (InterPro:IPR006439); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT2G41250.1); Has 5555 Blast hits to 5555 proteins in 1508 species: Archae - 313; Bacteria - 4016; Metazoa - 183; Fungi - 73; Plants - 110; Viruses - 0; Other Eukaryotes - 860 (source: NCBI BLink). & (reliability: 474.0) & (original description: no original description)
Gene families : OG_42_0001270 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001270_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Klebsormidium release: Kfl00006_0050 | |
| Cluster | HCCA clusters: Cluster_27 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| LOC_Os07g46520 | No alias | rhythmically expressed gene 2 protein, putative, expressed | 0.01 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003729 | mRNA binding | IEP | Predicted GO |
| CC | GO:0005849 | mRNA cleavage factor complex | IEP | Predicted GO |
| BP | GO:0006378 | mRNA polyadenylation | IEP | Predicted GO |
| BP | GO:0006397 | mRNA processing | IEP | Predicted GO |
| BP | GO:0016071 | mRNA metabolic process | IEP | Predicted GO |
| BP | GO:0031123 | RNA 3'-end processing | IEP | Predicted GO |
| BP | GO:0031124 | mRNA 3'-end processing | IEP | Predicted GO |
| BP | GO:0043631 | RNA polyadenylation | IEP | Predicted GO |
| CC | GO:0044428 | nuclear part | IEP | Predicted GO |
| CC | GO:0044451 | nucleoplasm part | IEP | Predicted GO |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Predicted GO |
| MF | GO:0051540 | metal cluster binding | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |