Aliases : kfl00006_0350_v1.1
Description : (at5g17710 : 190.0) embryo defective 1241 (EMB1241); FUNCTIONS IN: copper ion binding; INVOLVED IN: protein folding, embryo development ending in seed dormancy; LOCATED IN: thylakoid, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GrpE nucleotide exchange factor (InterPro:IPR000740), GrpE nucleotide exchange factor, coiled-coil (InterPro:IPR013805), GrpE nucleotide exchange factor, head (InterPro:IPR009012); BEST Arabidopsis thaliana protein match is: Co-chaperone GrpE family protein (TAIR:AT1G36390.2); Has 8394 Blast hits to 8358 proteins in 2682 species: Archae - 138; Bacteria - 5138; Metazoa - 231; Fungi - 167; Plants - 159; Viruses - 7; Other Eukaryotes - 2554 (source: NCBI BLink). & (reliability: 380.0) & (original description: no original description)
Gene families : OG_42_0003002 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003002_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Klebsormidium release: Kfl00006_0350 | |
Cluster | HCCA clusters: Cluster_81 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
LOC_Os04g35180 | No alias | co-chaperone GrpE protein, putative, expressed | 0.01 | Orthogroups_2024-Update | |
Potri.005G171201 | No alias | Co-chaperone GrpE family protein | 0.01 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000774 | adenyl-nucleotide exchange factor activity | IEA | InterProScan predictions |
BP | GO:0006457 | protein folding | IEA | InterProScan predictions |
MF | GO:0042803 | protein homodimerization activity | IEA | InterProScan predictions |
MF | GO:0051087 | chaperone binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005739 | mitochondrion | IEP | Predicted GO |
BP | GO:0006364 | rRNA processing | IEP | Predicted GO |
CC | GO:0009523 | photosystem II | IEP | Predicted GO |
CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Predicted GO |
MF | GO:0015035 | protein disulfide oxidoreductase activity | IEP | Predicted GO |
MF | GO:0015036 | disulfide oxidoreductase activity | IEP | Predicted GO |
BP | GO:0016072 | rRNA metabolic process | IEP | Predicted GO |
MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | Predicted GO |
BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
CC | GO:1990204 | oxidoreductase complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000740 | GrpE | 134 | 296 |
No external refs found! |