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  5. Kfl00006_0430

Kfl00006_0430 (kfl00006_0430_v1.1)


Aliases : kfl00006_0430_v1.1

Description : (at5g55760 : 137.0) Encodes SRT1, a member of the SIR2 (sirtuin) family HDAC (histone deacetylase) (SRT1/AT5g55760, SRT2/AT5G09230).; sirtuin 1 (SRT1); FUNCTIONS IN: NAD binding, DNA binding, zinc ion binding, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; INVOLVED IN: protein amino acid deacetylation, chromatin silencing, regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: chromatin silencing complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent histone deacetylase, silent information regulator Sir2 (InterPro:IPR003000); BEST Arabidopsis thaliana protein match is: sirtuin 2 (TAIR:AT5G09230.7); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 274.0) & (original description: no original description)


Gene families : OG_42_0005716 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005716_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Klebsormidium release: Kfl00006_0430
Cluster HCCA clusters: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
evm.model.contig_598.3 No alias (at5g55760 : 148.0) Encodes SRT1, a member of the SIR2... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0070403 NAD+ binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IEP Predicted GO
MF GO:0008192 RNA guanylyltransferase activity IEP Predicted GO
MF GO:0008193 tRNA guanylyltransferase activity IEP Predicted GO
BP GO:0016073 snRNA metabolic process IEP Predicted GO
BP GO:0016180 snRNA processing IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034472 snRNA 3'-end processing IEP Predicted GO
BP GO:0034477 U6 snRNA 3'-end processing IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0043628 ncRNA 3'-end processing IEP Predicted GO
MF GO:0070568 guanylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003000 Sirtuin 72 171
IPR003000 Sirtuin 339 400
No external refs found!