Aliases : kfl00008_0510_v1.1
Description : (at3g18760 : 90.9) Translation elongation factor EF1B/ribosomal protein S6 family protein; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation; LOCATED IN: ribosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EF1B/ribosomal protein S6 (InterPro:IPR014717), Ribosomal protein S6 (InterPro:IPR000529); Has 42 Blast hits to 42 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 181.8) & (original description: no original description)
Gene families : OG_42_0005211 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005211_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Klebsormidium release: Kfl00008_0510 | |
Cluster | HCCA clusters: Cluster_50 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
99143 | No alias | Translation elongation factor EF1B/ribosomal protein S6... | 0.02 | Orthogroups_2024-Update | |
LOC_Os01g12090 | No alias | ribosomal protein S6 family protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
MA_33279g0010 | No alias | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update | |
Potri.018G113200 | No alias | Translation elongation factor EF1B/ribosomal protein S6... | 0.02 | Orthogroups_2024-Update | |
Sobic.003G015400.1 | No alias | component *(uS6m) of small mitoribosomal-subunit proteome | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | InterProScan predictions |
CC | GO:0005840 | ribosome | IEA | InterProScan predictions |
BP | GO:0006412 | translation | IEA | InterProScan predictions |
MF | GO:0019843 | rRNA binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004751 | ribose-5-phosphate isomerase activity | IEP | Predicted GO |
BP | GO:0006081 | cellular aldehyde metabolic process | IEP | Predicted GO |
BP | GO:0009052 | pentose-phosphate shunt, non-oxidative branch | IEP | Predicted GO |
MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Predicted GO |
MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | Predicted GO |
MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | Predicted GO |
BP | GO:0019682 | glyceraldehyde-3-phosphate metabolic process | IEP | Predicted GO |
BP | GO:0022900 | electron transport chain | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000529 | Ribosomal_S6 | 4 | 95 |
No external refs found! |