1. Home
  2. Species
  3. Klebsormidium nitens
  4. Sequence
  5. Kfl00010_0140

Kfl00010_0140 (kfl00010_0140_v1.1,...)


Aliases : kfl00010_0140_v1.1, kfl00010_0140_v1.1, kfl00010_0140_v1.1, kfl00010_0140_v1.1

Description : (p93107|pf20_chlre : 572.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (at5g67320 : 135.0) Encodes a WD-40 protein involved in histone deacetylation in response to abiotic stress.Identified in a screen for mutations with altered expression of stress induced genes. Functions as a repressor of cold tolerance induced genes. Loss of function mutants are hypersensitive to freezing.; high expression of osmotically responsive genes 15 (HOS15); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TBP-associated factor 5 (TAIR:AT5G25150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 252.0) & (original description: no original description)


Gene families : OG_42_0012017 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0012017_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Klebsormidium release: Kfl00010_0140
Cluster HCCA clusters: Cluster_16


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 453 490
IPR001680 WD40_repeat 411 448
IPR001680 WD40_repeat 328 364
IPR001680 WD40_repeat 496 532
IPR001680 WD40_repeat 369 406
IPR001680 WD40_repeat 580 616
No external refs found!