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  5. Kfl00017_0230

Kfl00017_0230 (kfl00017_0230_v1.1)


Aliases : kfl00017_0230_v1.1

Description : (at1g04980 : 385.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response.; PDI-like 2-2 (PDIL2-2); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 2-3 (TAIR:AT2G32920.1); Has 36254 Blast hits to 18629 proteins in 2906 species: Archae - 392; Bacteria - 18066; Metazoa - 5792; Fungi - 2053; Plants - 2624; Viruses - 46; Other Eukaryotes - 7281 (source: NCBI BLink). & (p38661|pdia6_medsa : 129.0) Probable protein disulfide-isomerase A6 precursor (EC 5.3.4.1) (P5) - Medicago sativa (Alfalfa) & (reliability: 770.0) & (original description: no original description)


Gene families : OG_42_0005698 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005698_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Klebsormidium release: Kfl00017_0230
Cluster HCCA clusters: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
Brara.J00316.1 No alias protein disulfide isomerase *(PDI-M) & protein disulfide... 0.01 Orthogroups_2024-Update
Sobic.002G222200.1 No alias protein disulfide isomerase *(PDI-M) & protein disulfide... 0.02 Orthogroups_2024-Update
Sopen07g024800 No alias Thioredoxin 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0045454 cell redox homeostasis IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002098 tRNA wobble uridine modification IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
CC GO:0033588 Elongator holoenzyme complex IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 165 264
IPR013766 Thioredoxin_domain 30 130
No external refs found!