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  5. Kfl00020_0040

Kfl00020_0040 (kfl00020_0040_v1.1)


Aliases : kfl00020_0040_v1.1

Description : (at1g15390 : 243.0) encodes a peptide deformylase-like protein. Removes N-formyl groups, a prerequisite for the action of methionine aminopeptidase during protein synthesis. Targeted to mitochondria. Requires Zn for catalysis.; peptide deformylase 1A (PDF1A); FUNCTIONS IN: peptide deformylase activity; INVOLVED IN: translation, co-translational protein modification; LOCATED IN: mitochondrion, chloroplast, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Formylmethionine deformylase (InterPro:IPR000181); BEST Arabidopsis thaliana protein match is: peptide deformylase 1B (TAIR:AT5G14660.2); Has 10999 Blast hits to 10999 proteins in 2667 species: Archae - 4; Bacteria - 8033; Metazoa - 124; Fungi - 0; Plants - 109; Viruses - 2; Other Eukaryotes - 2727 (source: NCBI BLink). & (reliability: 486.0) & (original description: no original description)


Gene families : OG_42_0007302 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007302_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Klebsormidium release: Kfl00020_0040
Cluster HCCA clusters: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g37510 No alias peptide deformylase, putative, expressed 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005795 Golgi stack IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
MF GO:0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
CC GO:0030677 ribonuclease P complex IEP Predicted GO
CC GO:0031984 organelle subcompartment IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
CC GO:0098791 Golgi subcompartment IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO
CC GO:1902555 endoribonuclease complex IEP Predicted GO
CC GO:1905348 endonuclease complex IEP Predicted GO
InterPro domains Description Start Stop
IPR023635 Peptide_deformylase 107 272
No external refs found!