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  5. Solyc06g062520

Solyc06g062520


Description : Dof zinc finger protein (AHRD V3.3 *** W9QMS6_9ROSA)


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g062520
Cluster HCCA clusters: Cluster_191

Target Alias Description ECC score Gene Family Method Actions
A4A49_10722 No alias dof zinc finger protein dof2.4 0.03 Orthogroups_2024-Update
At2g28810 No alias Dof zinc finger protein DOF2.2... 0.04 Orthogroups_2024-Update
Bradi1g26570 No alias TARGET OF MONOPTEROS 6 0.03 Orthogroups_2024-Update
Bradi4g04260 No alias OBF-binding protein 3 0.02 Orthogroups_2024-Update
Brara.D02286.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
GRMZM2G144172 No alias OBF-binding protein 3 0.03 Orthogroups_2024-Update
GRMZM2G327189 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.01G049400 No alias cycling DOF factor 3 0.03 Orthogroups_2024-Update
Glyma.05G018100 No alias OBF binding protein 4 0.03 Orthogroups_2024-Update
Glyma.06G124300 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.07G229600 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
Glyma.15G071400 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.19G118000 No alias cycling DOF factor 3 0.04 Orthogroups_2024-Update
HORVU1Hr1G074140.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
HORVU2Hr1G119160.3 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
HORVU3Hr1G116260.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
LOC_Os01g55340 No alias dof zinc finger domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g45200 No alias dof zinc finger domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g58190 No alias dof zinc finger domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_18267g0010 No alias (at5g62940 : 141.0) HCA2 induces the formation of... 0.02 Orthogroups_2024-Update
PSME_00053408-RA No alias (at5g39660 : 183.0) Dof-type zinc finger... 0.02 Orthogroups_2024-Update
Potri.006G084200 No alias Dof-type zinc finger DNA-binding family protein 0.06 Orthogroups_2024-Update
Pp1s392_2V6 No alias zinc finger 0.02 Orthogroups_2024-Update
Seita.9G259300.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Seita.9G452000.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Sobic.001G179300.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Solyc02g090310 No alias Dof zinc finger protein (AHRD V3.3 *-* W9QGW0_9ROSA) 0.03 Orthogroups_2024-Update
Solyc06g076030 No alias Dof zinc finger protein (AHRD V3.3 *** Q9M4G1_SOLTU) 0.02 Orthogroups_2024-Update
Solyc08g008500 No alias Dof zinc finger protein (AHRD V3.3 *** A0A0B6VI93_TOBAC) 0.03 Orthogroups_2024-Update
Sopen02g023480 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update
Sopen06g026650 No alias Dof domain, zinc finger 0.02 Orthogroups_2024-Update
Sopen10g005150 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR003851 Znf_Dof 19 75
No external refs found!