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  5. Kfl00028_0220

Kfl00028_0220 (kfl00028_0220_v1.1)


Aliases : kfl00028_0220_v1.1

Description : (at2g41900 : 319.0) CCCH-type zinc finger protein with ARM repeat domain; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: CCCH-type zinc finger protein with ARM repeat domain (TAIR:AT5G12850.1); Has 5399 Blast hits to 3519 proteins in 384 species: Archae - 10; Bacteria - 312; Metazoa - 2497; Fungi - 280; Plants - 489; Viruses - 8; Other Eukaryotes - 1803 (source: NCBI BLink). & (reliability: 638.0) & (original description: no original description)


Gene families : OG_42_0002653 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002653_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Klebsormidium release: Kfl00028_0220
Cluster HCCA clusters: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
At5g12850 No alias Zinc finger CCCH domain-containing protein 56... 0.03 Orthogroups_2024-Update
Glyma.10G100400 No alias CCCH-type zinc finger protein with ARM repeat domain 0.02 Orthogroups_2024-Update
MA_17746g0010 No alias (at2g41900 : 491.0) CCCH-type zinc finger protein with... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 307 327
No external refs found!