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  5. Solyc06g062630

Solyc06g062630


Description : LOB domain-containing protein, putative (AHRD V3.3 *-* B9SN30_RICCO)


Gene families : OG_42_0000073 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g062630
Cluster HCCA clusters: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
Glyma.10G213500 No alias LOB domain-containing protein 1 0.06 Orthogroups_2024-Update
LOC_Os01g39150 No alias DUF260 domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os01g39220 No alias DUF260 domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g03160 No alias DUF260 domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_902082g0010 No alias (at1g07900 : 123.0) LOB domain-containing protein 1... 0.02 Orthogroups_2024-Update
Mp7g17250.1 No alias transcription factor (AS2/LOB) 0.02 Orthogroups_2024-Update
PSME_00038331-RA No alias (at2g28500 : 134.0) LOB domain-containing protein 11... 0.04 Orthogroups_2024-Update
PSME_00039447-RA No alias (at2g28500 : 163.0) LOB domain-containing protein 11... 0.04 Orthogroups_2024-Update
Solyc06g064540 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc06g075330 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR004883 LOB 68 133
No external refs found!