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- Kfl00030_0070
Kfl00030_0070 (kfl00030_0070_v1.1,...)
Aliases : kfl00030_0070_v1.1, kfl00030_0070_v1.1
Description : (p48786|prh_petcr : 150.0) Pathogenesis-related homeodomain protein (PRHP) - Petroselinum crispum (Parsley) (Petroselinum hortense) & (at3g19510 : 140.0) Encodes a member of the PHD-finger homeodomain protein family. The HAT3.1 homeodomain is highly divergent in sequence even at positions that are almost invariable among homeodomains. HAT3.1 shows a preference for the sequence T(A/G)(A/C)ACCA, different from those bound by other homeodomains.; HAT3.1; FUNCTIONS IN: sequence-specific DNA binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of transcription, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: pathogenesis related homeodomain protein A (TAIR:AT4G29940.1); Has 21195 Blast hits to 13195 proteins in 937 species: Archae - 172; Bacteria - 5087; Metazoa - 6772; Fungi - 2621; Plants - 1255; Viruses - 207; Other Eukaryotes - 5081 (source: NCBI BLink). & (reliability: 280.0) & (original description: no original description)
Expression Profile
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Co-expression Networks
Type | Description | Actions |
Neighborhood | Klebsormidium release: Kfl00030_0070 | |
Cluster | HCCA clusters: Cluster_114 | |
Expression Context Conservation (ECC)
Target | Alias | Description | ECC score | Gene Family Method | Actions |
A4A49_09262 | No alias | pathogenesis-related homeodomain protein | 0.02 | Orthogroups_2024-Update | |
At4g29940 | No alias | Pathogenesis-related homeodomain protein... | 0.03 | Orthogroups_2024-Update | |
Glyma.13G100500 | No alias | pathogenesis related homeodomain protein A | 0.02 | Orthogroups_2024-Update | |
HORVU1Hr1G076380.1 | No alias | PHD-type transcription factor | 0.02 | Orthogroups_2024-Update | |
Potri.018G142400 | No alias | pathogenesis related homeodomain protein A | 0.02 | Orthogroups_2024-Update | |
Seita.5G316900.1 | No alias | PHD-type transcription factor | 0.02 | Orthogroups_2024-Update | |
Sobic.009G200500.1 | No alias | PHD-type transcription factor | 0.01 | Orthogroups_2024-Update | |
Functional Annotation
Type | GO Term | Name | Evidence | Source |
MF | GO:0003674 | molecular_function | None | Extended |
MF | GO:0003676 | nucleic acid binding | None | Extended |
MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
MF | GO:0005488 | binding | None | Extended |
MF | GO:0097159 | organic cyclic compound binding | None | Extended |
MF | GO:1901363 | heterocyclic compound binding | None | Extended |
Type | GO Term | Name | Evidence | Source |
MF | GO:0000166 | nucleotide binding | IEP | Predicted GO |
BP | GO:0000469 | cleavage involved in rRNA processing | IEP | Predicted GO |
MF | GO:0003774 | motor activity | IEP | Predicted GO |
MF | GO:0003777 | microtubule motor activity | IEP | Predicted GO |
MF | GO:0003909 | DNA ligase activity | IEP | Predicted GO |
MF | GO:0003910 | DNA ligase (ATP) activity | IEP | Predicted GO |
MF | GO:0004345 | glucose-6-phosphate dehydrogenase activity | IEP | Predicted GO |
MF | GO:0004817 | cysteine-tRNA ligase activity | IEP | Predicted GO |
MF | GO:0005524 | ATP binding | IEP | Predicted GO |
CC | GO:0005783 | endoplasmic reticulum | IEP | Predicted GO |
BP | GO:0005996 | monosaccharide metabolic process | IEP | Predicted GO |
BP | GO:0006006 | glucose metabolic process | IEP | Predicted GO |
BP | GO:0006013 | mannose metabolic process | IEP | Predicted GO |
BP | GO:0006423 | cysteinyl-tRNA aminoacylation | IEP | Predicted GO |
BP | GO:0006479 | protein methylation | IEP | Predicted GO |
BP | GO:0006928 | movement of cell or subcellular component | IEP | Predicted GO |
BP | GO:0007018 | microtubule-based movement | IEP | Predicted GO |
MF | GO:0008017 | microtubule binding | IEP | Predicted GO |
MF | GO:0008144 | drug binding | IEP | Predicted GO |
MF | GO:0008170 | N-methyltransferase activity | IEP | Predicted GO |
BP | GO:0008213 | protein alkylation | IEP | Predicted GO |
MF | GO:0008276 | protein methyltransferase activity | IEP | Predicted GO |
MF | GO:0015631 | tubulin binding | IEP | Predicted GO |
BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
MF | GO:0016278 | lysine N-methyltransferase activity | IEP | Predicted GO |
MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | Predicted GO |
BP | GO:0016458 | gene silencing | IEP | Predicted GO |
BP | GO:0016571 | histone methylation | IEP | Predicted GO |
MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | Predicted GO |
MF | GO:0017150 | tRNA dihydrouridine synthase activity | IEP | Predicted GO |
BP | GO:0018022 | peptidyl-lysine methylation | IEP | Predicted GO |
MF | GO:0018024 | histone-lysine N-methyltransferase activity | IEP | Predicted GO |
BP | GO:0019318 | hexose metabolic process | IEP | Predicted GO |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Predicted GO |
BP | GO:0031047 | gene silencing by RNA | IEP | Predicted GO |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Predicted GO |
BP | GO:0034968 | histone lysine methylation | IEP | Predicted GO |
MF | GO:0036094 | small molecule binding | IEP | Predicted GO |
MF | GO:0042054 | histone methyltransferase activity | IEP | Predicted GO |
BP | GO:0090305 | nucleic acid phosphodiester bond hydrolysis | IEP | Predicted GO |
BP | GO:0090501 | RNA phosphodiester bond hydrolysis | IEP | Predicted GO |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Predicted GO |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
IPR001356 | Homeobox_dom | 632 | 680 |
IPR019787 | Znf_PHD-finger | 289 | 342 |