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  5. Kfl00030_0260

Kfl00030_0260 (kfl00030_0260_v1.1)


Aliases : kfl00030_0260_v1.1

Description : (at1g02860 : 135.0) Encodes a likely ubiquitin E3 ligase with RING and SPX domains that is involved in mediating immune responses. Targeted by MIR827.; nitrogen limitation adaptation (NLA); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-related (TAIR:AT2G38920.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 270.0) & (original description: no original description)


Gene families : OG_42_0001676 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001676_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Klebsormidium release: Kfl00030_0260
Cluster HCCA clusters: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
Brara.J00136.1 No alias E3 ubiquitin ligase *(NLA) 0.02 Orthogroups_2024-Update
LOC_Os07g47590 No alias expressed protein 0.02 Orthogroups_2024-Update
MA_54183g0010 No alias (at2g38920 : 285.0) SPX (SYG1/Pho81/XPR1)... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
InterPro domains Description Start Stop
IPR027370 Znf-RING_LisH 244 292
No external refs found!