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  5. Kfl00033_0400

Kfl00033_0400 (kfl00033_0400_v1.1)


Aliases : kfl00033_0400_v1.1

Description : (at5g13580 : 434.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to nematode; LOCATED IN: membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G55090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7fmw4|pdr15_orysa : 226.0) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 868.0) & (original description: no original description)


Gene families : OG_42_0000830 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000830_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Klebsormidium release: Kfl00033_0400
Cluster HCCA clusters: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
A4A49_33736 No alias abc transporter g family member 8 0.02 Orthogroups_2024-Update
Potri.011G112100 No alias ABC-2 type transporter family protein 0.02 Orthogroups_2024-Update
Pp1s185_128V6 No alias white-brown-complex abc transporter family 0.02 Orthogroups_2024-Update
Pp1s71_147V6 No alias white-brown-complex abc transporter family 0.03 Orthogroups_2024-Update
Pp1s71_149V6 No alias white-brown-complex abc transporter family 0.04 Orthogroups_2024-Update
Seita.5G226500.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
evm.model.tig00021537.72 No alias (at2g01320 : 174.0) ABC-2 type transporter family... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
MF GO:0008198 ferrous iron binding IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0043085 positive regulation of catalytic activity IEP Predicted GO
BP GO:0044093 positive regulation of molecular function IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
BP GO:0065009 regulation of molecular function IEP Predicted GO
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 64 215
IPR013525 ABC_2_trans 351 559
No external refs found!