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  5. Solyc06g062860

Solyc06g062860


Description : Ataxin-2 related protein (AHRD V3.3 *** A2PZE4_IPONI)


Gene families : OG_42_0003413 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003413_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g062860
Cluster HCCA clusters: Cluster_229

Target Alias Description ECC score Gene Family Method Actions
Bradi1g56090 No alias CTC-interacting domain 4 0.02 Orthogroups_2024-Update
Glyma.07G036300 No alias CTC-interacting domain 4 0.03 Orthogroups_2024-Update
Glyma.15G027500 No alias CTC-interacting domain 4 0.03 Orthogroups_2024-Update
Pp1s358_21V6 No alias cid4 (ctc-interacting domain 4) protein binding 0.03 Orthogroups_2024-Update
evm.model.tig00000970.3 No alias (at3g14010 : 125.0) hydroxyproline-rich glycoprotein... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
InterPro domains Description Start Stop
IPR009604 LsmAD_domain 212 282
IPR025852 SM_dom_ATX 53 136
No external refs found!