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Description : RING-box protein (AHRD V3.3 *** Q2PYP4_ARAHY)
Gene families : OG_42_0002654 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002654_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc06g062940 | |
| Cluster | HCCA clusters: Cluster_223 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_16695 | No alias | ring-box protein 1a | 0.04 | Orthogroups_2024-Update | |
| GRMZM2G035341 | No alias | RING-box 1 | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | Predicted GO |
| MF | GO:0004871 | obsolete signal transducer activity | IEP | Predicted GO |
| MF | GO:0005515 | protein binding | IEP | Predicted GO |
| CC | GO:0005667 | transcription factor complex | IEP | Predicted GO |
| CC | GO:0005669 | transcription factor TFIID complex | IEP | Predicted GO |
| CC | GO:0005834 | heterotrimeric G-protein complex | IEP | Predicted GO |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | Predicted GO |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | Predicted GO |
| BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Predicted GO |
| BP | GO:0007165 | signal transduction | IEP | Predicted GO |
| BP | GO:0007186 | G protein-coupled receptor signaling pathway | IEP | Predicted GO |
| MF | GO:0008289 | lipid binding | IEP | Predicted GO |
| BP | GO:0009250 | glucan biosynthetic process | IEP | Predicted GO |
| BP | GO:0009987 | cellular process | IEP | Predicted GO |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Predicted GO |
| MF | GO:0016670 | oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor | IEP | Predicted GO |
| MF | GO:0016972 | thiol oxidase activity | IEP | Predicted GO |
| BP | GO:0030243 | cellulose metabolic process | IEP | Predicted GO |
| BP | GO:0030244 | cellulose biosynthetic process | IEP | Predicted GO |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | Predicted GO |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Predicted GO |
| BP | GO:0035556 | intracellular signal transduction | IEP | Predicted GO |
| BP | GO:0044042 | glucan metabolic process | IEP | Predicted GO |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | Predicted GO |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | Predicted GO |
| CC | GO:0044459 | plasma membrane part | IEP | Predicted GO |
| CC | GO:0044798 | nuclear transcription factor complex | IEP | Predicted GO |
| BP | GO:0050789 | regulation of biological process | IEP | Predicted GO |
| BP | GO:0050794 | regulation of cellular process | IEP | Predicted GO |
| BP | GO:0051273 | beta-glucan metabolic process | IEP | Predicted GO |
| BP | GO:0051274 | beta-glucan biosynthetic process | IEP | Predicted GO |
| BP | GO:0065007 | biological regulation | IEP | Predicted GO |
| CC | GO:0090575 | RNA polymerase II transcription factor complex | IEP | Predicted GO |
| CC | GO:0098797 | plasma membrane protein complex | IEP | Predicted GO |
| CC | GO:1905360 | GTPase complex | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR024766 | Znf_RING_H2 | 50 | 108 |
| No external refs found! |