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Description : DNA-directed RNA polymerase subunit alpha (AHRD V3.3 --* RPOA_ARATH)
Gene families : OG_42_0004126 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004126_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc06g063010 | |
| Cluster | HCCA clusters: Cluster_199 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bradi3g23167 | No alias | Function unknown | 0.03 | Orthogroups_2024-Update | |
| Glyma.07G042100 | No alias | Function unknown | 0.03 | Orthogroups_2024-Update | |
| Glyma.16G010400 | No alias | Function unknown | 0.05 | Orthogroups_2024-Update | |
| MA_911375g0010 | No alias | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update | |
| Seita.9G251300.1 | No alias | component *(SPT20/ADA5) of SAGA transcription... | 0.04 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Predicted GO |
| BP | GO:0001505 | regulation of neurotransmitter levels | IEP | Predicted GO |
| MF | GO:0003674 | molecular_function | IEP | Predicted GO |
| MF | GO:0003824 | catalytic activity | IEP | Predicted GO |
| MF | GO:0003857 | 3-hydroxyacyl-CoA dehydrogenase activity | IEP | Predicted GO |
| MF | GO:0004146 | dihydrofolate reductase activity | IEP | Predicted GO |
| MF | GO:0004420 | hydroxymethylglutaryl-CoA reductase (NADPH) activity | IEP | Predicted GO |
| MF | GO:0004602 | glutathione peroxidase activity | IEP | Predicted GO |
| MF | GO:0005488 | binding | IEP | Predicted GO |
| MF | GO:0005524 | ATP binding | IEP | Predicted GO |
| BP | GO:0006544 | glycine metabolic process | IEP | Predicted GO |
| BP | GO:0006545 | glycine biosynthetic process | IEP | Predicted GO |
| BP | GO:0006631 | fatty acid metabolic process | IEP | Predicted GO |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Predicted GO |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Predicted GO |
| MF | GO:0008144 | drug binding | IEP | Predicted GO |
| BP | GO:0008152 | metabolic process | IEP | Predicted GO |
| MF | GO:0008237 | metallopeptidase activity | IEP | Predicted GO |
| BP | GO:0009069 | serine family amino acid metabolic process | IEP | Predicted GO |
| BP | GO:0009070 | serine family amino acid biosynthetic process | IEP | Predicted GO |
| BP | GO:0009987 | cellular process | IEP | Predicted GO |
| BP | GO:0015936 | coenzyme A metabolic process | IEP | Predicted GO |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Predicted GO |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | Predicted GO |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
| MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Predicted GO |
| MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
| MF | GO:0016740 | transferase activity | IEP | Predicted GO |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Predicted GO |
| MF | GO:0017076 | purine nucleotide binding | IEP | Predicted GO |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Predicted GO |
| MF | GO:0032553 | ribonucleotide binding | IEP | Predicted GO |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Predicted GO |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | Predicted GO |
| MF | GO:0032947 | protein-containing complex scaffold activity | IEP | Predicted GO |
| BP | GO:0033865 | nucleoside bisphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0033875 | ribonucleoside bisphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0034032 | purine nucleoside bisphosphate metabolic process | IEP | Predicted GO |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
| MF | GO:0036094 | small molecule binding | IEP | Predicted GO |
| BP | GO:0042133 | neurotransmitter metabolic process | IEP | Predicted GO |
| BP | GO:0042136 | neurotransmitter biosynthetic process | IEP | Predicted GO |
| MF | GO:0043167 | ion binding | IEP | Predicted GO |
| MF | GO:0043168 | anion binding | IEP | Predicted GO |
| BP | GO:0043248 | proteasome assembly | IEP | Predicted GO |
| BP | GO:0044237 | cellular metabolic process | IEP | Predicted GO |
| BP | GO:0044238 | primary metabolic process | IEP | Predicted GO |
| BP | GO:0044281 | small molecule metabolic process | IEP | Predicted GO |
| MF | GO:0070569 | uridylyltransferase activity | IEP | Predicted GO |
| BP | GO:0071704 | organic substance metabolic process | IEP | Predicted GO |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Predicted GO |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Predicted GO |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Predicted GO |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |