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  5. Kfl00037_0290

Kfl00037_0290 (kfl00037_0290_v1.1)


Aliases : kfl00037_0290_v1.1

Description : (at4g05320 : 880.0) One of five polyubiquitin genes in A. thaliana. These genes encode the highly conserved 76-amino acid protein ubiquitin that is covalently attached to substrate proteins targeting most for degradation. Polyubiquitin genes are characterized by the presence of tandem repeats of the 228 bp that encode a ubiquitin monomer. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid.; polyubiquitin 10 (UBQ10); CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 4 (TAIR:AT5G20620.1); Has 32669 Blast hits to 7219 proteins in 726 species: Archae - 0; Bacteria - 99; Metazoa - 15287; Fungi - 3767; Plants - 6623; Viruses - 815; Other Eukaryotes - 6078 (source: NCBI BLink). & (p69326|ubiq_wheat : 150.0) Ubiquitin - Triticum aestivum (Wheat) & (reliability: 1760.0) & (original description: no original description)


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Klebsormidium release: Kfl00037_0290
Cluster HCCA clusters: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
271198 No alias polyubiquitin 10 0.02 Orthogroups_2024-Update
Bradi1g32700 No alias polyubiquitin 10 0.02 Orthogroups_2024-Update
Bradi1g32860 No alias polyubiquitin 10 0.02 Orthogroups_2024-Update
Bradi3g03957 No alias polyubiquitin 3 0.02 Orthogroups_2024-Update
Bradi4g10341 No alias polyubiquitin 10 0.01 Orthogroups_2024-Update
Brara.E02153.1 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
Brara.I02135.1 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
Brara.J02833.1 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
GRMZM2G047727 No alias Ubiquitin supergroup;Ribosomal protein L40e 0.02 Orthogroups_2024-Update
HORVU7Hr1G113500.1 No alias RUB ubiquitin-fold protein 0.01 Orthogroups_2024-Update
Sobic.004G273300.1 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
CC GO:0000813 ESCRT I complex IEP Predicted GO
MF GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016714 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Predicted GO
CC GO:0036452 ESCRT complex IEP Predicted GO
CC GO:0044440 endosomal part IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0071985 multivesicular body sorting pathway IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 155 226
IPR000626 Ubiquitin_dom 3 74
IPR000626 Ubiquitin_dom 383 454
IPR000626 Ubiquitin_dom 231 302
IPR000626 Ubiquitin_dom 79 150
IPR000626 Ubiquitin_dom 307 378
No external refs found!