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  5. Kfl00045_0090

Kfl00045_0090 (kfl00045_0090_v1.1)


Aliases : kfl00045_0090_v1.1

Description : (at1g29630 : 303.0) 5'-3' exonuclease family protein; FUNCTIONS IN: DNA binding, catalytic activity, nuclease activity; INVOLVED IN: DNA repair; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G18090.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 606.0) & (original description: no original description)


Gene families : OG_42_0003740 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003740_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Klebsormidium release: Kfl00045_0090
Cluster HCCA clusters: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
Glyma.08G120900 No alias 5\'-3\' exonuclease family protein 0.03 Orthogroups_2024-Update
MA_10431686g0010 No alias (at1g18090 : 401.0) 5'-3' exonuclease family protein;... 0.03 Orthogroups_2024-Update
Solyc03g119070 No alias LOW QUALITY:Flap endonuclease 1 (AHRD V3.3 *** A0A0K9P479_ZOSMR) 0.01 Orthogroups_2024-Update
evm.model.tig00000403.40 No alias (at1g29630 : 229.0) 5'-3' exonuclease family protein;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006515 protein quality control for misfolded or incompletely synthesized proteins IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
BP GO:0031144 proteasome localization IEP Predicted GO
CC GO:0031262 Ndc80 complex IEP Predicted GO
BP GO:0031503 protein-containing complex localization IEP Predicted GO
BP GO:0034629 cellular protein-containing complex localization IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0071630 nuclear protein quality control by the ubiquitin-proteasome system IEP Predicted GO
InterPro domains Description Start Stop
IPR006086 XPG-I_dom 76 162
No external refs found!