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  5. Kfl00045_0430

Kfl00045_0430 (kfl00045_0430_v1.1)


Aliases : kfl00045_0430_v1.1

Description : (at1g62020 : 1226.0) Coatomer, alpha subunit; FUNCTIONS IN: structural molecule activity, transporter activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, ER to Golgi vesicle-mediated transport; LOCATED IN: COPI vesicle coat, plasma membrane, CUL4 RING ubiquitin ligase complex, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Coatomer, WD associated region (InterPro:IPR006692), WD40 repeat, conserved site (InterPro:IPR019775), Cytochrome cd1-nitrite reductase-like, C-terminal haem d1 (InterPro:IPR011048), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Coatomer, alpha subunit (InterPro:IPR016391), WD40 repeat, subgroup (InterPro:IPR019781), Coatomer, alpha subunit, C-terminal (InterPro:IPR010714); BEST Arabidopsis thaliana protein match is: Coatomer, alpha subunit (TAIR:AT2G21390.1); Has 77998 Blast hits to 29937 proteins in 781 species: Archae - 58; Bacteria - 8535; Metazoa - 32327; Fungi - 16718; Plants - 10020; Viruses - 0; Other Eukaryotes - 10340 (source: NCBI BLink). & (p93107|pf20_chlre : 95.5) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 2452.0) & (original description: no original description)


Gene families : OG_42_0002646 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002646_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Klebsormidium release: Kfl00045_0430
Cluster HCCA clusters: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
A4A49_15962 No alias coatomer subunit alpha-1 0.01 Orthogroups_2024-Update
At2g21390 No alias Coatomer subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJT9] 0.02 Orthogroups_2024-Update
Bradi1g78470 No alias Coatomer, alpha subunit 0.02 Orthogroups_2024-Update
Bradi2g55640 No alias Coatomer, alpha subunit 0.02 Orthogroups_2024-Update
Brara.A00052.1 No alias subunit alpha of coat protein complex 0.01 Orthogroups_2024-Update
Brara.H01794.1 No alias subunit alpha of coat protein complex 0.02 Orthogroups_2024-Update
Cre13.g565850 No alias Coatomer, alpha subunit 0.04 Orthogroups_2024-Update
Glyma.10G199300 No alias Coatomer, alpha subunit 0.06 Orthogroups_2024-Update
Glyma.11G113000 No alias Coatomer, alpha subunit 0.02 Orthogroups_2024-Update
Glyma.12G038900 No alias Coatomer, alpha subunit 0.02 Orthogroups_2024-Update
Glyma.20G190900 No alias Coatomer, alpha subunit 0.02 Orthogroups_2024-Update
PSME_00024193-RA No alias (at1g62020 : 1949.0) Coatomer, alpha subunit; FUNCTIONS... 0.03 Orthogroups_2024-Update
PSME_00051512-RA No alias (at1g62020 : 1810.0) Coatomer, alpha subunit; FUNCTIONS... 0.04 Orthogroups_2024-Update
Potri.012G074800 No alias Coatomer, alpha subunit 0.03 Orthogroups_2024-Update
Potri.015G069700 No alias Coatomer, alpha subunit 0.01 Orthogroups_2024-Update
Pp1s11_79V6 No alias coatomer alpha 0.01 Orthogroups_2024-Update
Pp1s135_34V6 No alias coatomer alpha 0.07 Orthogroups_2024-Update
Pp1s86_189V6 No alias coatomer alpha 0.04 Orthogroups_2024-Update
Seita.5G140600.1 No alias subunit alpha of coat protein complex 0.03 Orthogroups_2024-Update
Seita.9G119500.1 No alias subunit alpha of coat protein complex 0.03 Orthogroups_2024-Update
Sobic.001G117800.1 No alias subunit alpha of coat protein complex 0.01 Orthogroups_2024-Update
Sobic.003G029600.1 No alias subunit alpha of coat protein complex 0.02 Orthogroups_2024-Update
Solyc07g032100 No alias Coatomer subunit alpha (AHRD V3.3 *** K4CDF4_SOLLC) 0.02 Orthogroups_2024-Update
evm.model.tig00000144.152 No alias (at1g62020 : 592.0) Coatomer, alpha subunit; FUNCTIONS... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
BP GO:0006886 intracellular protein transport IEA InterProScan predictions
BP GO:0016192 vesicle-mediated transport IEA InterProScan predictions
CC GO:0030117 membrane coat IEA InterProScan predictions
CC GO:0030126 COPI vesicle coat IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0000166 nucleotide binding IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0004645 phosphorylase activity IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006090 pyruvate metabolic process IEP Predicted GO
BP GO:0006091 generation of precursor metabolites and energy IEP Predicted GO
BP GO:0006096 glycolytic process IEP Predicted GO
BP GO:0006164 purine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
BP GO:0006733 oxidoreduction coenzyme metabolic process IEP Predicted GO
BP GO:0006754 ATP biosynthetic process IEP Predicted GO
BP GO:0006757 ATP generation from ADP IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008172 S-methyltransferase activity IEP Predicted GO
MF GO:0008184 glycogen phosphorylase activity IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
MF GO:0008705 methionine synthase activity IEP Predicted GO
BP GO:0009086 methionine biosynthetic process IEP Predicted GO
BP GO:0009108 coenzyme biosynthetic process IEP Predicted GO
BP GO:0009123 nucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009132 nucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009141 nucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Predicted GO
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009166 nucleotide catabolic process IEP Predicted GO
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0009260 ribonucleotide biosynthetic process IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
MF GO:0017069 snRNA binding IEP Predicted GO
MF GO:0017070 U6 snRNA binding IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0018196 peptidyl-asparagine modification IEP Predicted GO
BP GO:0018279 protein N-linked glycosylation via asparagine IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Predicted GO
BP GO:0019362 pyridine nucleotide metabolic process IEP Predicted GO
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Predicted GO
BP GO:0019439 aromatic compound catabolic process IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0030623 U5 snRNA binding IEP Predicted GO
MF GO:0031419 cobalamin binding IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Predicted GO
BP GO:0034655 nucleobase-containing compound catabolic process IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0042084 5-methyltetrahydrofolate-dependent methyltransferase activity IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
BP GO:0042866 pyruvate biosynthetic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046031 ADP metabolic process IEP Predicted GO
BP GO:0046034 ATP metabolic process IEP Predicted GO
BP GO:0046390 ribose phosphate biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
BP GO:0046434 organophosphate catabolic process IEP Predicted GO
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Predicted GO
BP GO:0046700 heterocycle catabolic process IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
BP GO:0046939 nucleotide phosphorylation IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0072522 purine-containing compound biosynthetic process IEP Predicted GO
BP GO:0072524 pyridine-containing compound metabolic process IEP Predicted GO
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1901292 nucleoside phosphate catabolic process IEP Predicted GO
BP GO:1901361 organic cyclic compound catabolic process IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 159 192
IPR001680 WD40_repeat 202 237
IPR001680 WD40_repeat 87 124
IPR001680 WD40_repeat 45 82
IPR001680 WD40_repeat 6 40
IPR010714 Coatomer_asu_C 778 1172
IPR006692 Coatomer_WD-assoc_reg 311 728
No external refs found!