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  5. Kfl00047_0160

Kfl00047_0160 (kfl00047_0160_v1.1)


Aliases : kfl00047_0160_v1.1

Description : (at3g23620 : 269.0) Ribosomal RNA processing Brix domain protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); Has 435 Blast hits to 425 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 152; Fungi - 138; Plants - 54; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (q9awm9|bxdc1_orysa : 268.0) Brix domain-containing protein 1 homolog - Oryza sativa (Rice) & (reliability: 538.0) & (original description: no original description)


Gene families : OG_42_0004817 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004817_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Klebsormidium release: Kfl00047_0160
Cluster HCCA clusters: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
At3g23620 No alias Ribosome production factor 2 homolog... 0.03 Orthogroups_2024-Update
Bradi2g57720 No alias Ribosomal RNA processing Brix domain protein 0.07 Orthogroups_2024-Update
Bradi4g31410 No alias Ribosomal RNA processing Brix domain protein 0.07 Orthogroups_2024-Update
Cre03.g197000 No alias Ribosomal RNA processing Brix domain protein 0.07 Orthogroups_2024-Update
GRMZM2G359874 No alias Ribosomal RNA processing Brix domain protein 0.03 Orthogroups_2024-Update
Glyma.13G151300 No alias Ribosomal RNA processing Brix domain protein 0.05 Orthogroups_2024-Update
HORVU5Hr1G061870.1 No alias component *(ARPF2) of ARPF2-ARRS1 complex 0.02 Orthogroups_2024-Update
MA_89741g0010 No alias (q9awm9|bxdc1_orysa : 399.0) Brix domain-containing... 0.02 Orthogroups_2024-Update
Mp4g01500.1 No alias component ARPF2 of ARPF2-ARRS1 complex 0.03 Orthogroups_2024-Update
Potri.015G088700 No alias Ribosomal RNA processing Brix domain protein 0.03 Orthogroups_2024-Update
Pp1s13_19V6 No alias brix domain containing 1 0.03 Orthogroups_2024-Update
Sobic.009G190300.1 No alias component *(ARPF2) of ARPF2-ARRS1 complex 0.02 Orthogroups_2024-Update
Solyc10g083600 No alias Brix domain-containing protein (AHRD V3.3 *** H9A0F8_NICBE) 0.07 Orthogroups_2024-Update
Sopen10g033080 No alias Brix domain 0.09 Orthogroups_2024-Update
evm.model.contig_462.6 No alias (at3g23620 : 201.0) Ribosomal RNA processing Brix domain... 0.07 Orthogroups_2024-Update
evm.model.tig00001003.36 No alias (at3g23620 : 175.0) Ribosomal RNA processing Brix domain... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0030488 tRNA methylation IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
CC GO:0034708 methyltransferase complex IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0043527 tRNA methyltransferase complex IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR007109 Brix 37 232
No external refs found!