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  5. Kfl00048_0060

Kfl00048_0060 (kfl00048_0060_v1.1,...)


Aliases : kfl00048_0060_v1.1, kfl00048_0060_v1.1

Description : (at4g26430 : 348.0) one of two genes encoding subunit 6 of COP9 signalosome complex; COP9 signalosome subunit 6B (CSN6B); CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: COP9 signalosome subunit 6A (TAIR:AT5G56280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 696.0) & (original description: no original description)


Gene families : OG_42_0005432 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005432_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Klebsormidium release: Kfl00048_0060
Cluster HCCA clusters: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
Cre11.g467647 No alias COP9 signalosome subunit 6B 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
CC GO:0030906 retromer, cargo-selective complex IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
InterPro domains Description Start Stop
IPR024969 Rpn11/EIF3F_C 166 280
IPR000555 JAMM/MPN+_dom 6 117
No external refs found!