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  5. Kfl00048_0450

Kfl00048_0450 (kfl00048_0450_v1.1)


Aliases : kfl00048_0450_v1.1

Description : (at4g01800 : 1272.0) Encodes the ATPase subunit of the chloroplast Sec translocation machinery which plays an essential role in chloroplast biogenesis and the regulation of photosynthesis, the absence of which triggers a retrograde signal, eventually leading to a reprogramming of chloroplast and mitochondrial gene expression.; Albino or Glassy Yellow 1 (AGY1); FUNCTIONS IN: ATPase activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity, ATP binding; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SecA, preprotein translocase (InterPro:IPR022491), SecA motor DEAD (InterPro:IPR014018), SecA Wing/Scaffold (InterPro:IPR011116), SecA preprotein, cross-linking domain (InterPro:IPR011130), SecA DEAD-like (InterPro:IPR011115), SecA conserved site (InterPro:IPR020937), SecA protein (InterPro:IPR000185); BEST Arabidopsis thaliana protein match is: Preprotein translocase SecA family protein (TAIR:AT1G21650.1). & (q36795|seca_spiol : 1259.0) Preprotein translocase secA subunit, chloroplast precursor - Spinacia oleracea (Spinach) & (reliability: 2544.0) & (original description: no original description)


Gene families : OG_42_0001932 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001932_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Klebsormidium release: Kfl00048_0450
Cluster HCCA clusters: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Cre12.g518000 No alias Albino or Glassy Yellow 1 0.02 Orthogroups_2024-Update
MA_9251669g0020 No alias (q41062|seca_pea : 165.0) Preprotein translocase secA... 0.02 Orthogroups_2024-Update
Solyc01g080840 No alias Protein translocase subunit SecA (AHRD V3.3 *** K4AXX7_SOLLC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0017038 protein import IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006090 pyruvate metabolic process IEP Predicted GO
BP GO:0006096 glycolytic process IEP Predicted GO
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Predicted GO
BP GO:0006757 ATP generation from ADP IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009132 nucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
BP GO:0042866 pyruvate biosynthetic process IEP Predicted GO
BP GO:0046031 ADP metabolic process IEP Predicted GO
BP GO:0046939 nucleotide phosphorylation IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR011130 SecA_preprotein_X-link_dom 336 441
IPR011116 SecA_Wing/Scaffold 792 1007
IPR011115 SecA_DEAD 116 485
No external refs found!