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  5. Solyc06g064540

Solyc06g064540


Description : LOB domain-containing protein, putative (AHRD V3.3 *** B9SXJ8_RICCO)


Gene families : OG_42_0000073 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g064540

Target Alias Description ECC score Gene Family Method Actions
A4A49_03191 No alias lob domain-containing protein 15 0.03 Orthogroups_2024-Update
At2g40470 No alias LOB domain-containing protein 15... 0.02 Orthogroups_2024-Update
Bradi2g57380 No alias Lateral organ boundaries (LOB) domain family protein 0.02 Orthogroups_2024-Update
Brara.I00725.1 No alias AS2/LOB-type transcription factor 0.04 Orthogroups_2024-Update
Glyma.05G040500 No alias Lateral organ boundaries (LOB) domain family protein 0.04 Orthogroups_2024-Update
Glyma.10G213500 No alias LOB domain-containing protein 1 0.02 Orthogroups_2024-Update
Glyma.13G349700 No alias LOB domain-containing protein 22 0.03 Orthogroups_2024-Update
Glyma.19G257300 No alias LOB domain-containing protein 11 0.03 Orthogroups_2024-Update
LOC_Os08g06659 No alias expressed protein 0.03 Orthogroups_2024-Update
MA_84752g0010 No alias (at2g40470 : 201.0) LOB domain-containing protein 15... 0.03 Orthogroups_2024-Update
MA_9839150g0010 No alias (at1g07900 : 148.0) LOB domain-containing protein 1... 0.02 Orthogroups_2024-Update
PSME_00007117-RA No alias (at1g31320 : 142.0) LOB domain-containing protein 4... 0.02 Orthogroups_2024-Update
PSME_00009389-RA No alias (at2g28500 : 147.0) LOB domain-containing protein 11... 0.02 Orthogroups_2024-Update
PSME_00039447-RA No alias (at2g28500 : 163.0) LOB domain-containing protein 11... 0.02 Orthogroups_2024-Update
Potri.001G081400 No alias LOB domain-containing protein 4 0.03 Orthogroups_2024-Update
Seita.9G443300.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.005G004700.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Solyc01g044520 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Solyc01g109240 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc05g048740 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Solyc06g005090 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update
Solyc06g050950 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc06g062630 No alias LOB domain-containing protein, putative (AHRD V3.3 *-*... 0.03 Orthogroups_2024-Update
Solyc06g071660 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc06g082310 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update
Solyc11g045530 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen06g033700 No alias Protein of unknown function DUF260 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0016168 chlorophyll binding IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
MF GO:0019825 oxygen binding IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
BP GO:0032957 inositol trisphosphate metabolic process IEP Predicted GO
BP GO:0043647 inositol phosphate metabolic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0047325 inositol tetrakisphosphate 1-kinase activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
MF GO:0051765 inositol tetrakisphosphate kinase activity IEP Predicted GO
MF GO:0051766 inositol trisphosphate kinase activity IEP Predicted GO
MF GO:0052725 inositol-1,3,4-trisphosphate 6-kinase activity IEP Predicted GO
MF GO:0052726 inositol-1,3,4-trisphosphate 5-kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004883 LOB 5 102
No external refs found!