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  5. Kfl00057_0170

Kfl00057_0170 (kfl00057_0170_v1.1)


Aliases : kfl00057_0170_v1.1

Description : (at2g18900 : 324.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT3G26480.1); Has 4620 Blast hits to 3140 proteins in 363 species: Archae - 18; Bacteria - 1955; Metazoa - 712; Fungi - 1091; Plants - 306; Viruses - 0; Other Eukaryotes - 538 (source: NCBI BLink). & (reliability: 648.0) & (original description: no original description)


Gene families : OG_42_0003452 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003452_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Klebsormidium release: Kfl00057_0170
Cluster HCCA clusters: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Bradi4g02100 No alias Transducin/WD40 repeat-like superfamily protein 0.09 Orthogroups_2024-Update
Brara.G00137.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Cre04.g215350 No alias Transducin/WD40 repeat-like superfamily protein 0.08 Orthogroups_2024-Update
Glyma.13G097400 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.17G062200 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Orthogroups_2024-Update
HORVU5Hr1G011850.3 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os12g41620 No alias WD domain, G-beta repeat domain containing protein, expressed 0.02 Orthogroups_2024-Update
Pp1s207_6V6 No alias F19F24.10; transducin family protein / WD-40 repeat... 0.04 Orthogroups_2024-Update
Seita.3G384700.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.008G163500.1 No alias Unknown function 0.08 Orthogroups_2024-Update
Solyc07g066410 No alias Transducin/WD-like repeat-protein (AHRD V3.3 *** G7JUE1_MEDTR) 0.07 Orthogroups_2024-Update
Sopen07g034580 No alias WD domain, G-beta repeat 0.12 Orthogroups_2024-Update
evm.model.contig_2673.3 No alias (at2g18900 : 111.0) Transducin/WD40 repeat-like... 0.06 Orthogroups_2024-Update
evm.model.tig00020554.131 No alias (at3g26480 : 124.0) Transducin family protein / WD-40... 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
MF GO:0004832 valine-tRNA ligase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006438 valyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 587 615
No external refs found!