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  5. Kfl00064_0290

Kfl00064_0290 (kfl00064_0290_v1.1)


Aliases : kfl00064_0290_v1.1

Description : (at4g18770 : 124.0) MYB98 is a member of the R2R3-MYB gene family, the members of which likely encode transcription factors. Within an ovule, MYB98 is expressed exclusively in the synergid cells, and mutations in this gene affect the female gametophyte specifically. myb98 female gametophytes are affected in two unique features of the synergid cell, pollen tube guidance and the filiform apparatus, but are otherwise normal. This suggests that MYB98 controls the development of specific features within the synergid cell during female gametophyte development. MYB98 also is expressed in trichomes and endosperm. Homozygous myb98 mutants exhibit no sporophytic defects, including trichome and endosperm defects.; myb domain protein 98 (MYB98); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 118 (TAIR:AT3G27785.1); Has 10125 Blast hits to 8427 proteins in 562 species: Archae - 0; Bacteria - 3; Metazoa - 1026; Fungi - 830; Plants - 5955; Viruses - 3; Other Eukaryotes - 2308 (source: NCBI BLink). & (p93417|gam1_orysa : 104.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (reliability: 248.0) & (original description: no original description)


Gene families : OG_42_0000047 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000047_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Klebsormidium release: Kfl00064_0290
Cluster HCCA clusters: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
Brara.D01385.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.02 Orthogroups_2024-Update
Brara.H02151.1 No alias MYB class-R2R3 subgroup-21 transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G093660 No alias myb domain protein 73 0.02 Orthogroups_2024-Update
Glyma.01G190100 No alias myb domain protein 73 0.01 Orthogroups_2024-Update
Glyma.04G042300 No alias myb domain protein 73 0.02 Orthogroups_2024-Update
Glyma.05G038500 No alias myb domain protein 98 0.02 Orthogroups_2024-Update
Glyma.11G052100 No alias myb domain protein 73 0.02 Orthogroups_2024-Update
Glyma.17G190900 No alias Homeodomain-like protein 0.02 Orthogroups_2024-Update
MA_10425867g0020 No alias (at1g69560 : 184.0) Encodes LOF2 (LATERAL ORGAN... 0.02 Orthogroups_2024-Update
Mp1g08640.1 No alias transcription factor (MYB) 0.02 Orthogroups_2024-Update
Mp7g16300.1 No alias transcription factor (MYB) 0.02 Orthogroups_2024-Update
PSME_00010642-RA No alias (at1g26780 : 220.0) Encodes LOF1 (LATERAL ORGAN... 0.02 Orthogroups_2024-Update
PSME_00038667-RA No alias (at5g67300 : 211.0) Member of the R2R3 factor MYB gene... 0.01 Orthogroups_2024-Update
Seita.5G044000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G141300.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.02 Orthogroups_2024-Update
Sobic.003G128900.1 No alias MYB class-R2R3 subgroup-21 transcription factor 0.02 Orthogroups_2024-Update
Sobic.009G103900.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0004418 hydroxymethylbilane synthase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004455 ketol-acid reductoisomerase activity IEP Predicted GO
MF GO:0004645 phosphorylase activity IEP Predicted GO
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
MF GO:0008184 glycogen phosphorylase activity IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0009081 branched-chain amino acid metabolic process IEP Predicted GO
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP Predicted GO
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 164 205
IPR001005 SANT/Myb 111 155
No external refs found!