Aliases : kfl00065_0380_v1.1
Description : (at1g79280 : 375.0) Encodes a 237-kDA protein with similarity to vertebrate Tpr, a long coiled-coil proteins of nuclear pore inner basket filaments. It is localized to the inner surface of the nuclear envelope and is a component of the nuclear pore-associated steps of sumoylation and mRNA export in plants. Mutations affect flowering time regulation and other developmental processes. Probably acts in the same pathway as ESD4 in affecting flowering time, vegetative and inflorescence development.; nuclear pore anchor (NUA); CONTAINS InterPro DOMAIN/s: Tetratricopeptide, MLP1/MLP2-like (InterPro:IPR012929). & (reliability: 750.0) & (original description: no original description)
Gene families : OG_42_0003732 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003732_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Klebsormidium release: Kfl00065_0380 | |
Cluster | HCCA clusters: Cluster_37 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
444132 | No alias | nuclear pore anchor | 0.01 | Orthogroups_2024-Update | |
Bradi3g59627 | No alias | nuclear pore anchor | 0.06 | Orthogroups_2024-Update | |
Glyma.08G162300 | No alias | nuclear pore anchor | 0.05 | Orthogroups_2024-Update | |
Glyma.15G265300 | No alias | nuclear pore anchor | 0.05 | Orthogroups_2024-Update | |
Seita.1G316200.1 | No alias | nucleoporin of nuclear pore complex *(NUA) | 0.02 | Orthogroups_2024-Update | |
Sobic.004G242400.1 | No alias | nucleoporin of nuclear pore complex *(NUA) | 0.03 | Orthogroups_2024-Update | |
Solyc06g053570 | No alias | No description available | 0.02 | Orthogroups_2024-Update | |
Sopen06g018680 | No alias | TPR/MLP1/MLP2-like protein | 0.02 | Orthogroups_2024-Update | |
evm.model.tig00000404.46 | No alias | (at1g79280 : 204.0) Encodes a 237-kDA protein with... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006606 | protein import into nucleus | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004066 | asparagine synthase (glutamine-hydrolyzing) activity | IEP | Predicted GO |
MF | GO:0004176 | ATP-dependent peptidase activity | IEP | Predicted GO |
MF | GO:0004402 | histone acetyltransferase activity | IEP | Predicted GO |
MF | GO:0005488 | binding | IEP | Predicted GO |
CC | GO:0005669 | transcription factor TFIID complex | IEP | Predicted GO |
BP | GO:0006473 | protein acetylation | IEP | Predicted GO |
BP | GO:0006475 | internal protein amino acid acetylation | IEP | Predicted GO |
BP | GO:0006528 | asparagine metabolic process | IEP | Predicted GO |
BP | GO:0006529 | asparagine biosynthetic process | IEP | Predicted GO |
BP | GO:0006914 | autophagy | IEP | Predicted GO |
MF | GO:0008080 | N-acetyltransferase activity | IEP | Predicted GO |
MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Predicted GO |
BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Predicted GO |
MF | GO:0016407 | acetyltransferase activity | IEP | Predicted GO |
MF | GO:0016410 | N-acyltransferase activity | IEP | Predicted GO |
BP | GO:0016573 | histone acetylation | IEP | Predicted GO |
MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | Predicted GO |
BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | Predicted GO |
BP | GO:0018394 | peptidyl-lysine acetylation | IEP | Predicted GO |
BP | GO:0032774 | RNA biosynthetic process | IEP | Predicted GO |
MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | Predicted GO |
MF | GO:0043167 | ion binding | IEP | Predicted GO |
MF | GO:0043169 | cation binding | IEP | Predicted GO |
BP | GO:0043543 | protein acylation | IEP | Predicted GO |
CC | GO:0044798 | nuclear transcription factor complex | IEP | Predicted GO |
MF | GO:0046872 | metal ion binding | IEP | Predicted GO |
MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Predicted GO |
MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | Predicted GO |
BP | GO:0061919 | process utilizing autophagic mechanism | IEP | Predicted GO |
CC | GO:0090575 | RNA polymerase II transcription factor complex | IEP | Predicted GO |
MF | GO:0140110 | transcription regulator activity | IEP | Predicted GO |
CC | GO:1902554 | serine/threonine protein kinase complex | IEP | Predicted GO |
CC | GO:1902911 | protein kinase complex | IEP | Predicted GO |
CC | GO:1990316 | Atg1/ULK1 kinase complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR012929 | TPR/MLP1 | 1037 | 1158 |
No external refs found! |