1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc06g065400

Solyc06g065400


Description : SNARE associated Golgi protein family (AHRD V3.3 *** AT1G71940.1)


Gene families : OG_42_0001736 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001736_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g065400
Cluster HCCA clusters: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
A4A49_07869 No alias putative membrane protein 0.03 Orthogroups_2024-Update
LOC_Os02g46660 No alias SNARE associated Golgi protein, putative, expressed 0.02 Orthogroups_2024-Update
Pp1s15_433V6 No alias gtk16 protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0050080 malonyl-CoA decarboxylase activity IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
InterPro domains Description Start Stop
IPR032816 SNARE_assoc 140 259
No external refs found!