Aliases : kfl00076_0150_v1.1, kfl00076_0150_v1.1
Description : (p08927|rubb_pea : 851.0) RuBisCO large subunit-binding protein subunit beta, chloroplast precursor (60 kDa chaperonin subunit beta) (CPN-60 beta) - Pisum sativum (Garden pea) & (at1g55490 : 850.0) encodes the beta subunit of the chloroplast chaperonin 60, a homologue of bacterial GroEL. Mutants in this gene develops lesions on its leaves, expresses systemic acquired resistance (SAR) and develops accelerated cell death to heat shock stress. The protein has molecular chaperone activity for suppressing protein aggregation in vitro.; chaperonin 60 beta (CPN60B); FUNCTIONS IN: protein binding; INVOLVED IN: protein folding, systemic acquired resistance, cell death, response to cold, chaperone mediated protein folding requiring cofactor; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G13470.1); Has 34209 Blast hits to 34175 proteins in 8723 species: Archae - 804; Bacteria - 21846; Metazoa - 1741; Fungi - 1612; Plants - 841; Viruses - 2; Other Eukaryotes - 7363 (source: NCBI BLink). & (reliability: 1686.0) & (original description: no original description)
Gene families : OG_42_0000358 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000358_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Klebsormidium release: Kfl00076_0150 | |
Cluster | HCCA clusters: Cluster_27 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
168153 | No alias | chaperonin 60 beta | 0.02 | Orthogroups_2024-Update | |
At5g18820 | No alias | Chaperonin 60 subunit alpha 2, chloroplastic... | 0.03 | Orthogroups_2024-Update | |
At5g56500 | No alias | Chaperonin 60 subunit beta 3, chloroplastic... | 0.02 | Orthogroups_2024-Update | |
Bradi3g00480 | No alias | chaperonin 60 beta | 0.03 | Orthogroups_2024-Update | |
Bradi4g38090 | No alias | TCP-1/cpn60 chaperonin family protein | 0.02 | Orthogroups_2024-Update | |
Bradi5g02890 | No alias | chaperonin-60alpha | 0.04 | Orthogroups_2024-Update | |
Brara.C03496.1 | No alias | chaperone *(Hsp60) | 0.05 | Orthogroups_2024-Update | |
Brara.D01674.1 | No alias | subunit alpha of Cpn60 chaperonin complex & subunit... | 0.05 | Orthogroups_2024-Update | |
Brara.E01461.1 | No alias | chaperone *(Hsp60) & subunit beta of Cpn60 chaperonin... | 0.07 | Orthogroups_2024-Update | |
Cre04.g231222 | No alias | chaperonin-60alpha | 0.03 | Orthogroups_2024-Update | |
Cre06.g309100 | No alias | heat shock protein 60 | 0.02 | Orthogroups_2024-Update | |
Cre07.g339150 | No alias | TCP-1/cpn60 chaperonin family protein | 0.05 | Orthogroups_2024-Update | |
Cre17.g741450 | No alias | chaperonin 60 beta | 0.03 | Orthogroups_2024-Update | |
GRMZM2G074790 | No alias | heat shock protein 60-3A | 0.03 | Orthogroups_2024-Update | |
GRMZM2G416120 | No alias | heat shock protein 60 | 0.04 | Orthogroups_2024-Update | |
Glyma.15G250500 | No alias | TCP-1/cpn60 chaperonin family protein | 0.02 | Orthogroups_2024-Update | |
Glyma.20G079300 | No alias | heat shock protein 60 | 0.02 | Orthogroups_2024-Update | |
HORVU0Hr1G038830.19 | No alias | subunit alpha of Cpn60 chaperonin complex & subunit... | 0.02 | Orthogroups_2024-Update | |
HORVU1Hr1G038680.8 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
MA_10436324g0010 | No alias | (at3g23990 : 851.0) mitochondrial chaperonin HSP. assist... | 0.05 | Orthogroups_2024-Update | |
PSME_00000058-RA | No alias | (at3g13470 : 709.0) TCP-1/cpn60 chaperonin family... | 0.01 | Orthogroups_2024-Update | |
PSME_00013351-RA | No alias | (p08927|rubb_pea : 701.0) RuBisCO large subunit-binding... | 0.03 | Orthogroups_2024-Update | |
Potri.001G002500 | No alias | TCP-1/cpn60 chaperonin family protein | 0.02 | Orthogroups_2024-Update | |
Potri.001G054400 | No alias | heat shock protein 60 | 0.03 | Orthogroups_2024-Update | |
Potri.003G173900 | No alias | heat shock protein 60 | 0.02 | Orthogroups_2024-Update | |
Pp1s149_289V6 | No alias | -like atpase | 0.02 | Orthogroups_2024-Update | |
Pp1s276_75V6 | No alias | ru large subunit-binding protein subunit beta | 0.02 | Orthogroups_2024-Update | |
Seita.3G163700.1 | No alias | chaperone *(Hsp60) | 0.04 | Orthogroups_2024-Update | |
Solyc01g028810 | No alias | Chaperonin-60 beta subunit (AHRD V3.3 *** P93570_SOLTU) | 0.04 | Orthogroups_2024-Update | |
Solyc02g068730 | No alias | Chaperonin 60 alpha subunit (AHRD V3.3 *** Q9ZTV1_CANLI) | 0.02 | Orthogroups_2024-Update | |
Solyc09g091180 | No alias | Chaperonin CPN60, mitochondrial (AHRD V3.3 *** CH60A_ARATH) | 0.03 | Orthogroups_2024-Update | |
Sopen01g016850 | No alias | TCP-1/cpn60 chaperonin family | 0.02 | Orthogroups_2024-Update | |
Sopen03g039670 | No alias | TCP-1/cpn60 chaperonin family | 0.03 | Orthogroups_2024-Update | |
Sopen05g031970 | No alias | TCP-1/cpn60 chaperonin family | 0.05 | Orthogroups_2024-Update | |
Sopen09g034150 | No alias | TCP-1/cpn60 chaperonin family | 0.03 | Orthogroups_2024-Update | |
Sopen11g028490 | No alias | TCP-1/cpn60 chaperonin family | 0.02 | Orthogroups_2024-Update | |
evm.model.contig_4417.1 | No alias | (at2g28000 : 575.0) Encodes chaperonin-60 alpha, a... | 0.03 | Orthogroups_2024-Update | |
evm.model.contig_552.1 | No alias | (q05046|ch62_cucma : 684.0) Chaperonin CPN60-2,... | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003735 | structural constituent of ribosome | IEP | Predicted GO |
MF | GO:0003743 | translation initiation factor activity | IEP | Predicted GO |
MF | GO:0005198 | structural molecule activity | IEP | Predicted GO |
CC | GO:0005575 | cellular_component | IEP | Predicted GO |
CC | GO:0005622 | intracellular | IEP | Predicted GO |
CC | GO:0005840 | ribosome | IEP | Predicted GO |
CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Predicted GO |
BP | GO:0006364 | rRNA processing | IEP | Predicted GO |
BP | GO:0006396 | RNA processing | IEP | Predicted GO |
BP | GO:0006412 | translation | IEP | Predicted GO |
BP | GO:0006457 | protein folding | IEP | Predicted GO |
BP | GO:0006518 | peptide metabolic process | IEP | Predicted GO |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0007275 | multicellular organism development | IEP | Predicted GO |
BP | GO:0009058 | biosynthetic process | IEP | Predicted GO |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0009555 | pollen development | IEP | Predicted GO |
BP | GO:0009987 | cellular process | IEP | Predicted GO |
BP | GO:0016072 | rRNA metabolic process | IEP | Predicted GO |
BP | GO:0019538 | protein metabolic process | IEP | Predicted GO |
BP | GO:0032501 | multicellular organismal process | IEP | Predicted GO |
BP | GO:0032502 | developmental process | IEP | Predicted GO |
CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0043043 | peptide biosynthetic process | IEP | Predicted GO |
BP | GO:0043170 | macromolecule metabolic process | IEP | Predicted GO |
CC | GO:0043226 | organelle | IEP | Predicted GO |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predicted GO |
BP | GO:0043603 | cellular amide metabolic process | IEP | Predicted GO |
BP | GO:0043604 | amide biosynthetic process | IEP | Predicted GO |
BP | GO:0044237 | cellular metabolic process | IEP | Predicted GO |
BP | GO:0044238 | primary metabolic process | IEP | Predicted GO |
BP | GO:0044249 | cellular biosynthetic process | IEP | Predicted GO |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0044267 | cellular protein metabolic process | IEP | Predicted GO |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predicted GO |
CC | GO:0044424 | intracellular part | IEP | Predicted GO |
CC | GO:0044444 | cytoplasmic part | IEP | Predicted GO |
CC | GO:0044464 | cell part | IEP | Predicted GO |
BP | GO:0048229 | gametophyte development | IEP | Predicted GO |
BP | GO:0048856 | anatomical structure development | IEP | Predicted GO |
MF | GO:0051082 | unfolded protein binding | IEP | Predicted GO |
BP | GO:0071704 | organic substance metabolic process | IEP | Predicted GO |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predicted GO |
BP | GO:1901576 | organic substance biosynthetic process | IEP | Predicted GO |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002423 | Cpn60/TCP-1 | 86 | 589 |
No external refs found! |