- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : kfl00079_0100_v1.1
Description : (at3g12260 : 105.0) LYR family of Fe/S cluster biogenesis protein; FUNCTIONS IN: catalytic activity; LOCATED IN: mitochondrion, respiratory chain complex I, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 252 Blast hits to 252 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 119; Fungi - 50; Plants - 50; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 210.0) & (original description: no original description)
Gene families : OG_42_0007024 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007024_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Klebsormidium release: Kfl00079_0100 | |
| Cluster | HCCA clusters: Cluster_86 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 77479 | No alias | LYR family of Fe/S cluster biogenesis protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.09G091002 | No alias | LYR family of Fe/S cluster biogenesis protein | 0.03 | Orthogroups_2024-Update | |
| Sobic.003G170300.1 | No alias | component *(NDUFA6/B14) of NADH dehydrogenase alpha subcomplex | 0.03 | Orthogroups_2024-Update | |
| evm.model.tig00001049.4 | No alias | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004751 | ribose-5-phosphate isomerase activity | IEP | Predicted GO |
| MF | GO:0005509 | calcium ion binding | IEP | Predicted GO |
| BP | GO:0006081 | cellular aldehyde metabolic process | IEP | Predicted GO |
| BP | GO:0009052 | pentose-phosphate shunt, non-oxidative branch | IEP | Predicted GO |
| MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | Predicted GO |
| MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | Predicted GO |
| BP | GO:0019682 | glyceraldehyde-3-phosphate metabolic process | IEP | Predicted GO |
| CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | Predicted GO |
| MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
| BP | GO:0022900 | electron transport chain | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |