Solyc06g065820

Description : Ethylene Response Factor H.1

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc06g065820
Cluster	HCCA clusters: Cluster_64

Target	Alias	Description	ECC score	Gene Family Method
A4A49_03202	No alias	ethylene-responsive transcription factor erf053	0.03	Orthogroups_2024-Update
A4A49_06467	No alias	ethylene-responsive transcription factor crf4	0.03	Orthogroups_2024-Update
A4A49_21566	No alias	ethylene-responsive transcription factor erf087	0.03	Orthogroups_2024-Update
At1g77200	No alias	Ethylene-responsive transcription factor ERF037...	0.02	Orthogroups_2024-Update
At5g19790	No alias	Ethylene-responsive transcription factor RAP2-11...	0.04	Orthogroups_2024-Update
Brara.A01788.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
Brara.D00707.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Brara.G00808.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Glyma.06G163700	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.06G236400	No alias	ethylene responsive element binding factor 4	0.03	Orthogroups_2024-Update
Glyma.12G103100	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.13G040400	No alias	cytokinin response factor 4	0.03	Orthogroups_2024-Update
Glyma.17G124100	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
Glyma.18G018200	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.20G168500	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
HORVU2Hr1G098330.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
HORVU6Hr1G062380.3	No alias	subgroup ERF-IX transcription factor	0.04	Orthogroups_2024-Update
LOC_Os06g06970	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os09g11460	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_8984558g0010	No alias	(at1g74930 : 107.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_924346g0010	No alias	(at1g77200 : 104.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
Potri.002G124000	No alias	related to AP2 1	0.03	Orthogroups_2024-Update
Potri.011G056900	No alias	ERF domain protein 12	0.03	Orthogroups_2024-Update
Potri.015G136300	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Pp1s259_97V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Seita.2G156200.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Seita.2G215500.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.03	Orthogroups_2024-Update
Seita.3G272600.1	No alias	transcription factor component *(HRE/RAP2.12) of...	0.03	Orthogroups_2024-Update
Seita.5G115000.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.02	Orthogroups_2024-Update
Sobic.001G002500.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.003G324500.1	No alias	subgroup ERF-VIII transcription factor	0.02	Orthogroups_2024-Update
Sobic.004G171300.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Solyc01g095500	No alias	Sl Cytokinin Response Factor 5	0.03	Orthogroups_2024-Update
Solyc02g077840	No alias	Ethylene-responsive transcription factor, putative (AHRD...	0.04	Orthogroups_2024-Update
Solyc04g051360	No alias	Ethylene Response Factor D.1	0.05	Orthogroups_2024-Update
Solyc05g052040	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.04	Orthogroups_2024-Update
Solyc05g052050	No alias	DNA-binding protein Pti4	0.04	Orthogroups_2024-Update
Solyc09g089910	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Solyc11g011750	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Sopen03g024400	No alias	AP2 domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Predicted GO
MF	GO:0003684	damaged DNA binding	IEP	Predicted GO
MF	GO:0003954	NADH dehydrogenase activity	IEP	Predicted GO
MF	GO:0003993	acid phosphatase activity	IEP	Predicted GO
MF	GO:0004066	asparagine synthase (glutamine-hydrolyzing) activity	IEP	Predicted GO
MF	GO:0004518	nuclease activity	IEP	Predicted GO
MF	GO:0005381	iron ion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0006528	asparagine metabolic process	IEP	Predicted GO
BP	GO:0006529	asparagine biosynthetic process	IEP	Predicted GO
BP	GO:0006826	iron ion transport	IEP	Predicted GO
MF	GO:0008137	NADH dehydrogenase (ubiquinone) activity	IEP	Predicted GO
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	Predicted GO
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	Predicted GO
MF	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	IEP	Predicted GO
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	Predicted GO
MF	GO:0016787	hydrolase activity	IEP	Predicted GO
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Predicted GO
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	Predicted GO
BP	GO:0017004	cytochrome complex assembly	IEP	Predicted GO
BP	GO:0034755	iron ion transmembrane transport	IEP	Predicted GO
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0050136	NADH dehydrogenase (quinone) activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	7	56

External Links

No external refs found!

Solyc06g065820

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation