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  5. Solyc06g065940

Solyc06g065940


Description : Far1-related sequence 6-like protein (AHRD V3.3 *-* A0A0B0MXF2_GOSAR)


Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g065940
Cluster HCCA clusters: Cluster_275

Target Alias Description ECC score Gene Family Method Actions
Glyma.03G069701 No alias FAR1-related sequence 12 0.03 Orthogroups_2024-Update
Potri.004G209100 No alias FAR1-related sequence 9 0.03 Orthogroups_2024-Update
Potri.006G256300 No alias FAR1-related sequence 6 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000781 chromosome, telomeric region IEP Predicted GO
CC GO:0000784 nuclear chromosome, telomeric region IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0004451 isocitrate lyase activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
MF GO:0016833 oxo-acid-lyase activity IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
MF GO:0042162 telomeric DNA binding IEP Predicted GO
MF GO:0043047 single-stranded telomeric DNA binding IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
MF GO:0098847 sequence-specific single stranded DNA binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!