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Description : Alba DNA/RNA-binding protein (AHRD V3.3 *** AT2G34160.1)
Gene families : OG_42_0000995 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000995_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc06g065980 | |
| Cluster | HCCA clusters: Cluster_224 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Sopen06g024580 | No alias | Alba | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004003 | ATP-dependent DNA helicase activity | IEP | Predicted GO |
| MF | GO:0004129 | cytochrome-c oxidase activity | IEP | Predicted GO |
| MF | GO:0004175 | endopeptidase activity | IEP | Predicted GO |
| MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | Predicted GO |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Predicted GO |
| MF | GO:0004386 | helicase activity | IEP | Predicted GO |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Predicted GO |
| CC | GO:0005739 | mitochondrion | IEP | Predicted GO |
| CC | GO:0005839 | proteasome core complex | IEP | Predicted GO |
| BP | GO:0006470 | protein dephosphorylation | IEP | Predicted GO |
| BP | GO:0007034 | vacuolar transport | IEP | Predicted GO |
| MF | GO:0008026 | ATP-dependent helicase activity | IEP | Predicted GO |
| MF | GO:0008094 | DNA-dependent ATPase activity | IEP | Predicted GO |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Predicted GO |
| MF | GO:0015002 | heme-copper terminal oxidase activity | IEP | Predicted GO |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Predicted GO |
| BP | GO:0016311 | dephosphorylation | IEP | Predicted GO |
| MF | GO:0016675 | oxidoreductase activity, acting on a heme group of donors | IEP | Predicted GO |
| MF | GO:0016676 | oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor | IEP | Predicted GO |
| MF | GO:0016791 | phosphatase activity | IEP | Predicted GO |
| CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | Predicted GO |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | Predicted GO |
| MF | GO:0043138 | 3'-5' DNA helicase activity | IEP | Predicted GO |
| MF | GO:0043140 | ATP-dependent 3'-5' DNA helicase activity | IEP | Predicted GO |
| MF | GO:0070001 | aspartic-type peptidase activity | IEP | Predicted GO |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | Predicted GO |
| MF | GO:0070035 | purine NTP-dependent helicase activity | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002775 | DNA/RNA-bd_Alba-like | 20 | 82 |
| No external refs found! |