Aliases : kfl00094_0070_v1.1
Description : (at1g13260 : 233.0) Encodes an AP2/B3 domain transcription factor which is upregulated in response to low temperature. It contains a B3 DNA binding domain. It has circadian regulation and may function as a negative growth regulator.; related to ABI3/VP1 1 (RAV1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Transcriptional factor B3 (InterPro:IPR003340), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response DNA binding factor 3 (TAIR:AT3G25730.1); Has 6277 Blast hits to 6015 proteins in 258 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 6251; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 466.0) & (original description: no original description)
Gene families : OG_42_0000305 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000305_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Klebsormidium release: Kfl00094_0070 | |
Cluster | HCCA clusters: Cluster_104 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
110104 | No alias | related to ABI3/VP1 1 | 0.01 | Orthogroups_2024-Update | |
A4A49_27413 | No alias | ap2erf and b3 domain-containing transcription factor rav1 | 0.02 | Orthogroups_2024-Update | |
At1g25560 | No alias | AP2/ERF and B3 domain-containing transcription repressor... | 0.02 | Orthogroups_2024-Update | |
Potri.016G074500 | No alias | AP2/B3-like transcriptional factor family protein | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | InterProScan predictions |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005739 | mitochondrion | IEP | Predicted GO |
BP | GO:0006633 | fatty acid biosynthetic process | IEP | Predicted GO |
MF | GO:0008134 | transcription factor binding | IEP | Predicted GO |
MF | GO:0016790 | thiolester hydrolase activity | IEP | Predicted GO |
MF | GO:0016854 | racemase and epimerase activity | IEP | Predicted GO |
MF | GO:0016857 | racemase and epimerase activity, acting on carbohydrates and derivatives | IEP | Predicted GO |
No external refs found! |