1. Home
  2. Species
  3. Klebsormidium nitens
  4. Sequence
  5. Kfl00098_0020

Kfl00098_0020 (kfl00098_0020_v1.1)


Aliases : kfl00098_0020_v1.1

Description : (at4g10110 : 84.3) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G18510.1); Has 3478 Blast hits to 3175 proteins in 382 species: Archae - 0; Bacteria - 389; Metazoa - 1438; Fungi - 566; Plants - 665; Viruses - 0; Other Eukaryotes - 420 (source: NCBI BLink). & (reliability: 168.6) & (original description: no original description)


Gene families : OG_42_0004643 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004643_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Klebsormidium release: Kfl00098_0020

Target Alias Description ECC score Gene Family Method Actions
Seita.3G233900.1 No alias component *(RBM7) of Nuclear Exosome Targeting (NEXT)... 0.02 Orthogroups_2024-Update
Sobic.009G146100.1 No alias component *(RBM7) of Nuclear Exosome Targeting (NEXT)... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0070449 elongin complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 7 72
No external refs found!