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  5. Kfl00102_0260

Kfl00102_0260 (kfl00102_0260_v1.1,...)


Aliases : kfl00102_0260_v1.1, kfl00102_0260_v1.1

Description : (at1g17370 : 262.0) oligouridylate binding protein 1B (UBP1B); FUNCTIONS IN: mRNA 3'-UTR binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G14100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p19684|roc5_nicsy : 83.6) 33 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (reliability: 508.0) & (original description: no original description)


Gene families : OG_42_0001825 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001825_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Klebsormidium release: Kfl00102_0260
Cluster HCCA clusters: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
PSME_00000112-RA No alias (at1g17370 : 289.0) oligouridylate binding protein 1B... 0.01 Orthogroups_2024-Update
Solyc03g122180 No alias RNA-binding family protein (AHRD V3.3 *** A0A061GD25_THECC) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 126 196
IPR000504 RRM_dom 41 107
IPR000504 RRM_dom 291 356
No external refs found!