1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc06g066620

Solyc06g066620


Description : Thylakoid membrane phosphoprotein, chloroplastic (AHRD V3.3 *** A0A1D1ZKM1_9ARAE)


Gene families : OG_42_0000658 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000658_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g066620
Cluster HCCA clusters: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
Brara.E00101.1 No alias regulatory factor *(CURT) of thylakoid grana stacking 0.03 Orthogroups_2024-Update
Brara.F00206.1 No alias regulatory factor *(CURT) of thylakoid grana stacking 0.03 Orthogroups_2024-Update
GRMZM2G075074 No alias Function unknown 0.02 Orthogroups_2024-Update
Glyma.16G017600 No alias photosystem I P subunit 0.05 Orthogroups_2024-Update
Mp6g20860.1 No alias Protein CURVATURE THYLAKOID 1C, chloroplastic... 0.02 Orthogroups_2024-Update
Potri.014G093900 No alias Function unknown 0.03 Orthogroups_2024-Update
Potri.014G106400 No alias photosystem I P subunit 0.03 Orthogroups_2024-Update
Pp1s212_34V6 No alias threonine endopeptidase 0.02 Orthogroups_2024-Update
Seita.9G342500.1 No alias regulatory factor *(CURT) of thylakoid grana stacking 0.03 Orthogroups_2024-Update
Sopen10g005560 No alias CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005779 integral component of peroxisomal membrane IEP Predicted GO
CC GO:0005886 plasma membrane IEP Predicted GO
MF GO:0008987 quinolinate synthetase A activity IEP Predicted GO
BP GO:0009435 NAD biosynthetic process IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0019674 NAD metabolic process IEP Predicted GO
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
InterPro domains Description Start Stop
IPR025564 CAAD_dom 123 206
No external refs found!