Kfl00113_0150 (kfl00113_0150_v1.1)

Aliases : kfl00113_0150_v1.1

Description : (p08926|ruba_pea : 818.0) RuBisCO large subunit-binding protein subunit alpha, chloroplast precursor (60 kDa chaperonin subunit alpha) (CPN-60 alpha) - Pisum sativum (Garden pea) & (at2g28000 : 816.0) Encodes chaperonin-60 alpha, a molecular chaperone involved in Rubisco folding. Mutants display aberrant chloroplast and embryo development.; chaperonin-60alpha (CPN60A); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, chloroplast organization, embryo development; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT5G18820.1); Has 33896 Blast hits to 33887 proteins in 8716 species: Archae - 792; Bacteria - 21835; Metazoa - 1656; Fungi - 1573; Plants - 797; Viruses - 2; Other Eukaryotes - 7241 (source: NCBI BLink). & (reliability: 1632.0) & (original description: no original description)

Gene families : OG_42_0000358 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000358_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Klebsormidium release: Kfl00113_0150
Cluster	HCCA clusters: Cluster_27

Target	Alias	Description	ECC score	Gene Family Method
Bradi5g02890	No alias	chaperonin-60alpha	0.02	Orthogroups_2024-Update
Brara.C03496.1	No alias	chaperone *(Hsp60)	0.03	Orthogroups_2024-Update
Brara.D01674.1	No alias	subunit alpha of Cpn60 chaperonin complex & subunit...	0.05	Orthogroups_2024-Update
Brara.E01461.1	No alias	chaperone *(Hsp60) & subunit beta of Cpn60 chaperonin...	0.02	Orthogroups_2024-Update
Cre07.g339150	No alias	TCP-1/cpn60 chaperonin family protein	0.03	Orthogroups_2024-Update
Cre17.g741450	No alias	chaperonin 60 beta	0.02	Orthogroups_2024-Update
Glyma.10G127800	No alias	heat shock protein 60	0.02	Orthogroups_2024-Update
Glyma.20G019400	No alias	TCP-1/cpn60 chaperonin family protein	0.02	Orthogroups_2024-Update
MA_97627g0010	No alias	(p08927\|rubb_pea : 646.0) RuBisCO large subunit-binding...	0.02	Orthogroups_2024-Update
Mp6g16880.1	No alias	chaperone (Hsp60)	0.02	Orthogroups_2024-Update
PSME_00016110-RA	No alias	(p08926\|ruba_pea : 852.0) RuBisCO large subunit-binding...	0.01	Orthogroups_2024-Update
Potri.001G002500	No alias	TCP-1/cpn60 chaperonin family protein	0.02	Orthogroups_2024-Update
Pp1s15_485V6	No alias	ru large subunit-binding protein subunit beta	0.02	Orthogroups_2024-Update
Seita.2G129300.1	No alias	subunit alpha of Cpn60 chaperonin complex & subunit...	0.02	Orthogroups_2024-Update
Solyc01g028810	No alias	Chaperonin-60 beta subunit (AHRD V3.3 *** P93570_SOLTU)	0.04	Orthogroups_2024-Update
Solyc09g091180	No alias	Chaperonin CPN60, mitochondrial (AHRD V3.3 *** CH60A_ARATH)	0.02	Orthogroups_2024-Update
Solyc11g069790	No alias	Chaperonin 60 alpha subunit (AHRD V3.3 *** Q9ZTV1_CANLI)	0.03	Orthogroups_2024-Update
evm.model.tig00020943.69	No alias	(p08823\|ruba_wheat : 426.0) RuBisCO large...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0003735	structural constituent of ribosome	IEP	Predicted GO
MF	GO:0003743	translation initiation factor activity	IEP	Predicted GO
MF	GO:0003746	translation elongation factor activity	IEP	Predicted GO
MF	GO:0003937	IMP cyclohydrolase activity	IEP	Predicted GO
MF	GO:0004643	phosphoribosylaminoimidazolecarboxamide formyltransferase activity	IEP	Predicted GO
MF	GO:0004807	triose-phosphate isomerase activity	IEP	Predicted GO
MF	GO:0005198	structural molecule activity	IEP	Predicted GO
CC	GO:0005840	ribosome	IEP	Predicted GO
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEP	Predicted GO
BP	GO:0006412	translation	IEP	Predicted GO
BP	GO:0006414	translational elongation	IEP	Predicted GO
BP	GO:0006518	peptide metabolic process	IEP	Predicted GO
MF	GO:0008135	translation factor activity, RNA binding	IEP	Predicted GO
BP	GO:0009058	biosynthetic process	IEP	Predicted GO
BP	GO:0009059	macromolecule biosynthetic process	IEP	Predicted GO
MF	GO:0016209	antioxidant activity	IEP	Predicted GO
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	Predicted GO
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	Predicted GO
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	Predicted GO
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	Predicted GO
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	Predicted GO
MF	GO:0019238	cyclohydrolase activity	IEP	Predicted GO
BP	GO:0019538	protein metabolic process	IEP	Predicted GO
CC	GO:0032991	protein-containing complex	IEP	Predicted GO
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:0043043	peptide biosynthetic process	IEP	Predicted GO
BP	GO:0043170	macromolecule metabolic process	IEP	Predicted GO
CC	GO:0043226	organelle	IEP	Predicted GO
CC	GO:0043228	non-membrane-bounded organelle	IEP	Predicted GO
CC	GO:0043229	intracellular organelle	IEP	Predicted GO
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Predicted GO
BP	GO:0043603	cellular amide metabolic process	IEP	Predicted GO
BP	GO:0043604	amide biosynthetic process	IEP	Predicted GO
BP	GO:0044237	cellular metabolic process	IEP	Predicted GO
BP	GO:0044249	cellular biosynthetic process	IEP	Predicted GO
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Predicted GO
BP	GO:0044267	cellular protein metabolic process	IEP	Predicted GO
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Predicted GO
CC	GO:0044424	intracellular part	IEP	Predicted GO
CC	GO:0044444	cytoplasmic part	IEP	Predicted GO
CC	GO:0044464	cell part	IEP	Predicted GO
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Predicted GO
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	Predicted GO
BP	GO:1901576	organic substance biosynthetic process	IEP	Predicted GO
CC	GO:1990904	ribonucleoprotein complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002423	Cpn60/TCP-1	94	597

External Links

No external refs found!

Kfl00113_0150 (kfl00113_0150_v1.1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation