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  5. Solyc01g068320

Solyc01g068320


Description : chromatin remodeling 31 (AHRD V3.3 *** AT1G05490.1)


Gene families : OG_42_0000461 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000461_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g068320
Cluster HCCA clusters: Cluster_222

Target Alias Description ECC score Gene Family Method Actions
At3g31900 No alias ATP-dependent helicase family protein... 0.03 Orthogroups_2024-Update
Bradi2g21450 No alias SNF2 domain-containing protein / helicase... 0.02 Orthogroups_2024-Update
Glyma.08G339900 No alias chromatin remodeling 31 0.02 Orthogroups_2024-Update
LOC_Os02g43460 No alias required to maintain repression 1, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g49210 No alias helicase conserved C-terminal domain containing protein,... 0.02 Orthogroups_2024-Update
Solyc08g077600 No alias LOW QUALITY:chromatin remodeling 31 (AHRD V3.3 *-* AT1G05490.1) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007062 sister chromatid cohesion IEP Predicted GO
BP GO:0007064 mitotic sister chromatid cohesion IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
CC GO:0031390 Ctf18 RFC-like complex IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000330 SNF2_N 71 347
IPR001650 Helicase_C 403 517
No external refs found!