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  5. Solyc06g068200

Solyc06g068200


Description : Far1-related sequence 6 (AHRD V3.3 *** A0A061G8J5_THECC)


Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g068200
Cluster HCCA clusters: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
A4A49_19470 No alias protein far-red impaired response 1 0.05 Orthogroups_2024-Update
At2g27110 No alias Protein FAR1-RELATED SEQUENCE 3... 0.04 Orthogroups_2024-Update
Brara.G03428.1 No alias FRS/FRF-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.01G202800 No alias FAR1-related sequence 5 0.05 Orthogroups_2024-Update
Glyma.04G193200 No alias FAR1-related sequence 5 0.03 Orthogroups_2024-Update
LOC_Os01g19050 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g01950 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g39680 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
Pp1s222_125V6 No alias No description available 0.03 Orthogroups_2024-Update
Solyc07g042600 No alias Transposon-like element Lyt2-2 DNA (AHRD V3.3 *** D5MNY6_SOLLC) 0.03 Orthogroups_2024-Update
Sopen07g024050 No alias SWIM zinc finger 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
InterPro domains Description Start Stop
IPR018289 MULE_transposase_dom 388 473
IPR004330 FAR1_DNA_bnd_dom 182 263
No external refs found!