Aliases : kfl00126_0010_v1.1
Description : (at3g12080 : 574.0) embryo defective 2738 (emb2738); FUNCTIONS IN: GTP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), GTP-binding, EngA (InterPro:IPR016484), GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: GTP binding;GTP binding (TAIR:AT5G39960.1); Has 46500 Blast hits to 25681 proteins in 2968 species: Archae - 249; Bacteria - 36237; Metazoa - 387; Fungi - 432; Plants - 421; Viruses - 0; Other Eukaryotes - 8774 (source: NCBI BLink). & (reliability: 1148.0) & (original description: no original description)
Gene families : OG_42_0007627 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007627_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Klebsormidium release: Kfl00126_0010 | |
Cluster | HCCA clusters: Cluster_13 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi4g12180 | No alias | GTP-binding family protein | 0.04 | Orthogroups_2024-Update | |
Brara.E02878.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Cre16.g658450 | No alias | GTP-binding family protein | 0.02 | Orthogroups_2024-Update | |
Pp1s123_84V6 | No alias | gtp-binding protein | 0.03 | Orthogroups_2024-Update | |
Seita.8G208000.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
evm.model.contig_2130.10 | No alias | (at3g12080 : 169.0) embryo defective 2738 (emb2738);... | 0.04 | Orthogroups_2024-Update | |
evm.model.contig_2130.11 | No alias | (at3g12080 : 186.0) embryo defective 2738 (emb2738);... | 0.07 | Orthogroups_2024-Update | |
evm.model.tig00020780.28 | No alias | (at3g12080 : 327.0) embryo defective 2738 (emb2738);... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005525 | GTP binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000012 | single strand break repair | IEP | Predicted GO |
BP | GO:0001510 | RNA methylation | IEP | Predicted GO |
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003677 | DNA binding | IEP | Predicted GO |
MF | GO:0004857 | enzyme inhibitor activity | IEP | Predicted GO |
MF | GO:0004860 | protein kinase inhibitor activity | IEP | Predicted GO |
MF | GO:0004861 | cyclin-dependent protein serine/threonine kinase inhibitor activity | IEP | Predicted GO |
CC | GO:0005634 | nucleus | IEP | Predicted GO |
CC | GO:0005730 | nucleolus | IEP | Predicted GO |
BP | GO:0006396 | RNA processing | IEP | Predicted GO |
BP | GO:0006399 | tRNA metabolic process | IEP | Predicted GO |
BP | GO:0006400 | tRNA modification | IEP | Predicted GO |
BP | GO:0007050 | cell cycle arrest | IEP | Predicted GO |
BP | GO:0008033 | tRNA processing | IEP | Predicted GO |
MF | GO:0008134 | transcription factor binding | IEP | Predicted GO |
MF | GO:0008175 | tRNA methyltransferase activity | IEP | Predicted GO |
BP | GO:0009451 | RNA modification | IEP | Predicted GO |
BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
MF | GO:0016426 | tRNA (adenine) methyltransferase activity | IEP | Predicted GO |
MF | GO:0016429 | tRNA (adenine-N1-)-methyltransferase activity | IEP | Predicted GO |
MF | GO:0016538 | cyclin-dependent protein serine/threonine kinase regulator activity | IEP | Predicted GO |
MF | GO:0019207 | kinase regulator activity | IEP | Predicted GO |
MF | GO:0019210 | kinase inhibitor activity | IEP | Predicted GO |
MF | GO:0019887 | protein kinase regulator activity | IEP | Predicted GO |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predicted GO |
MF | GO:0030291 | protein serine/threonine kinase inhibitor activity | IEP | Predicted GO |
BP | GO:0030488 | tRNA methylation | IEP | Predicted GO |
CC | GO:0031515 | tRNA (m1A) methyltransferase complex | IEP | Predicted GO |
BP | GO:0032259 | methylation | IEP | Predicted GO |
BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
CC | GO:0034708 | methyltransferase complex | IEP | Predicted GO |
BP | GO:0042254 | ribosome biogenesis | IEP | Predicted GO |
CC | GO:0043226 | organelle | IEP | Predicted GO |
CC | GO:0043227 | membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Predicted GO |
BP | GO:0043414 | macromolecule methylation | IEP | Predicted GO |
CC | GO:0043527 | tRNA methyltransferase complex | IEP | Predicted GO |
BP | GO:0044085 | cellular component biogenesis | IEP | Predicted GO |
CC | GO:0044424 | intracellular part | IEP | Predicted GO |
CC | GO:0044464 | cell part | IEP | Predicted GO |
BP | GO:0045454 | cell redox homeostasis | IEP | Predicted GO |
BP | GO:0045786 | negative regulation of cell cycle | IEP | Predicted GO |
BP | GO:0046834 | lipid phosphorylation | IEP | Predicted GO |
BP | GO:0046854 | phosphatidylinositol phosphorylation | IEP | Predicted GO |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Predicted GO |
CC | GO:1990234 | transferase complex | IEP | Predicted GO |
No external refs found! |