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  5. Solyc06g068480

Solyc06g068480


Description : Low PSII Accumulation 3 isoform 3 (AHRD V3.3 *** A0A061G863_THECC)


Gene families : OG_42_0005888 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005888_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Solyc06g068480
Cluster HCCA clusters: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
Cre03.g184550 No alias Low PSII Accumulation 3 0.02 Orthogroups_2024-Update
HORVU6Hr1G009480.11 No alias protein involved in PS-II assembly *(LPA3) 0.03 Orthogroups_2024-Update
Sobic.004G012900.1 No alias protein involved in PS-II assembly *(LPA3) 0.02 Orthogroups_2024-Update
Sopen06g025730 No alias Domain of unknown function (DUF1995) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006023 aminoglycan biosynthetic process IEP Predicted GO
BP GO:0006024 glycosaminoglycan biosynthetic process IEP Predicted GO
BP GO:0006029 proteoglycan metabolic process IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
BP GO:0009100 glycoprotein metabolic process IEP Predicted GO
BP GO:0009101 glycoprotein biosynthetic process IEP Predicted GO
BP GO:0015012 heparan sulfate proteoglycan biosynthetic process IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
BP GO:0030166 proteoglycan biosynthetic process IEP Predicted GO
BP GO:0030201 heparan sulfate proteoglycan metabolic process IEP Predicted GO
BP GO:0030203 glycosaminoglycan metabolic process IEP Predicted GO
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR018962 DUF1995 90 352
No external refs found!