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  5. Solyc06g068540

Solyc06g068540


Description : ATP-dependent DNA helicase (AHRD V3.3 *** AT2G24100.1)


Gene families : OG_42_0001656 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001656_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g068540
Cluster HCCA clusters: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
At2g24100 No alias ATP-dependent DNA helicase [Source:UniProtKB/TrEMBL;Acc:Q9ZUI1] 0.03 Orthogroups_2024-Update
Glyma.02G206600 No alias Function unknown 0.03 Orthogroups_2024-Update
Potri.018G102800 No alias Function unknown 0.03 Orthogroups_2024-Update
Seita.2G147200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.4G046100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen03g036590 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Sopen06g025800 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!