Kfl00142_0100 (kfl00142_0100_v1.1)

Aliases : kfl00142_0100_v1.1

Description : (at3g57490 : 392.0) Ribosomal protein S5 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, ribosome, intracellular, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5, eukaryotic/archaeal (InterPro:IPR005711), Ribosomal protein S5, N-terminal (InterPro:IPR013810), Double-stranded RNA-binding-like (InterPro:IPR014720), Ribosomal protein S5, C-terminal (InterPro:IPR005324), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 (InterPro:IPR000851), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Ribosomal protein S5, N-terminal, conserved site (InterPro:IPR018192); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 family protein (TAIR:AT1G59359.1); Has 8574 Blast hits to 8565 proteins in 2893 species: Archae - 263; Bacteria - 5125; Metazoa - 697; Fungi - 227; Plants - 154; Viruses - 0; Other Eukaryotes - 2108 (source: NCBI BLink). & (reliability: 784.0) & (original description: no original description)

Gene families : OG_42_0002117 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002117_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Klebsormidium release: Kfl00142_0100
Cluster	HCCA clusters: Cluster_24

Target	Alias	Description	ECC score	Gene Family Method
A4A49_17312	No alias	40s ribosomal protein s2-4	0.01	Orthogroups_2024-Update
At1g58380	No alias	At1g59359 [Source:UniProtKB/TrEMBL;Acc:G1JSI6]	0.01	Orthogroups_2024-Update
At3g57490	No alias	40S ribosomal protein S2-4...	0.01	Orthogroups_2024-Update
Bradi1g54270	No alias	Ribosomal protein S5 family protein	0.06	Orthogroups_2024-Update
Brara.A02366.1	No alias	component *(uS5) of small ribosomal-subunit (SSU) proteome	0.01	Orthogroups_2024-Update
Brara.C02137.1	No alias	component *(uS5) of small ribosomal-subunit (SSU) proteome	0.04	Orthogroups_2024-Update
Brara.E00249.1	No alias	component *(uS5) of small ribosomal-subunit (SSU) proteome	0.05	Orthogroups_2024-Update
Cre01.g039250	No alias	Ribosomal protein S5 family protein	0.01	Orthogroups_2024-Update
HORVU3Hr1G086050.2	No alias	component *(uS5) of small ribosomal-subunit (SSU) proteome	0.03	Orthogroups_2024-Update
HORVU5Hr1G109910.2	No alias	component *(uS5) of small ribosomal-subunit (SSU) proteome	0.02	Orthogroups_2024-Update
LOC_Os03g59310	No alias	ribosomal protein, putative, expressed	0.02	Orthogroups_2024-Update
Mp5g04380.1	No alias	component RPS2 of SSU proteome	0.02	Orthogroups_2024-Update
Mp5g05010.1	No alias	component RPS2 of SSU proteome	0.02	Orthogroups_2024-Update
Mp5g15970.1	No alias	component RPS2 of SSU proteome	0.04	Orthogroups_2024-Update
Pp1s10_190V6	No alias	40s ribosomal protein	0.02	Orthogroups_2024-Update
Pp1s274_5V6	No alias	40s ribosomal protein	0.03	Orthogroups_2024-Update
Pp1s400_15V6	No alias	40s ribosomal protein	0.04	Orthogroups_2024-Update
Pp1s411_32V6	No alias	40s ribosomal protein	0.03	Orthogroups_2024-Update
Seita.2G079700.1	No alias	component *(uS5) of small ribosomal-subunit (SSU) proteome	0.03	Orthogroups_2024-Update
Seita.9G044700.1	No alias	component *(uS5) of small ribosomal-subunit (SSU) proteome	0.04	Orthogroups_2024-Update
Sobic.001G046100.1	No alias	component *(uS5) of small ribosomal-subunit (SSU) proteome	0.06	Orthogroups_2024-Update
Sobic.001G046300.1	No alias	component *(uS5) of small ribosomal-subunit (SSU) proteome	0.05	Orthogroups_2024-Update
Solyc04g063290	No alias	40S ribosomal protein S2 (AHRD V3.3 *** K7WJZ4_SOLTU)	0.07	Orthogroups_2024-Update
Solyc04g074300	No alias	40S ribosomal protein S2 (AHRD V3.3 *** K7WJZ4_SOLTU)	0.05	Orthogroups_2024-Update
Sopen04g026210	No alias	Ribosomal protein S5, N-terminal domain	0.06	Orthogroups_2024-Update
Sopen04g029430	No alias	Ribosomal protein S5, N-terminal domain	0.03	Orthogroups_2024-Update
evm.model.contig_4442.1	No alias	(at1g58684 : 326.0) Ribosomal protein S5 family protein;...	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	InterProScan predictions
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan predictions
MF	GO:0005198	structural molecule activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	InterProScan predictions
BP	GO:0006412	translation	IEA	InterProScan predictions
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005622	intracellular	IEP	Predicted GO
MF	GO:0009055	electron transfer activity	IEP	Predicted GO
MF	GO:0020037	heme binding	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR013810	Ribosomal_S5_N	91	155
IPR005324	Ribosomal_S5_C	175	245

External Links

No external refs found!

Kfl00142_0100 (kfl00142_0100_v1.1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation