Kfl00144_0120 (kfl00144_0120_v1.1,...)

Aliases : kfl00144_0120_v1.1, kfl00144_0120_v1.1

Description : (at3g62250 : 249.0) ubiquitin 5 (UBQ5); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: protein ubiquitination involved in ubiquitin-dependent protein catabolic process, translation; LOCATED IN: cytosolic small ribosomal subunit; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ribosomal protein S27a (InterPro:IPR002906), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 6 (TAIR:AT2G47110.2); Has 12703 Blast hits to 7391 proteins in 781 species: Archae - 108; Bacteria - 19; Metazoa - 5541; Fungi - 1408; Plants - 3106; Viruses - 188; Other Eukaryotes - 2333 (source: NCBI BLink). & (p69326|ubiq_wheat : 150.0) Ubiquitin - Triticum aestivum (Wheat) & (reliability: 498.0) & (original description: no original description)

Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Klebsormidium release: Kfl00144_0120
Cluster	HCCA clusters: Cluster_24

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g68940	No alias	Ubiquitin supergroup;Ribosomal protein L40e	0.02	Orthogroups_2024-Update
Bradi4g38540	No alias	ubiquitin extension protein 1	0.02	Orthogroups_2024-Update
Brara.C01815.1	No alias	component *(eL40) of large ribosomal-subunit (LSU) proteome	0.06	Orthogroups_2024-Update
Brara.C02349.1	No alias	component *(eS31) of small ribosomal-subunit (SSU) proteome	0.04	Orthogroups_2024-Update
Brara.D00067.1	No alias	component *(eS31) of small ribosomal-subunit (SSU) proteome	0.03	Orthogroups_2024-Update
Brara.E00858.1	No alias	component *(eL40) of large ribosomal-subunit (LSU) proteome	0.04	Orthogroups_2024-Update
Brara.E00859.1	No alias	component *(eL40) of large ribosomal-subunit (LSU) proteome	0.03	Orthogroups_2024-Update
Brara.G00981.1	No alias	component *(eS31) of small ribosomal-subunit (SSU) proteome	0.04	Orthogroups_2024-Update
Brara.I03566.1	No alias	component *(eL40) of large ribosomal-subunit (LSU) proteome	0.04	Orthogroups_2024-Update
Brara.I04302.1	No alias	component *(eS31) of small ribosomal-subunit (SSU) proteome	0.05	Orthogroups_2024-Update
Cre01.g007051	No alias	Ubiquitin supergroup;Ribosomal protein L40e	0.03	Orthogroups_2024-Update
Cre06.g273600	No alias	Ribosomal protein S27a / Ubiquitin family protein	0.06	Orthogroups_2024-Update
GRMZM2G006293	No alias	Ribosomal protein S27a / Ubiquitin family protein	0.02	Orthogroups_2024-Update
GRMZM2G047732	No alias	Ribosomal protein S27a / Ubiquitin family protein	0.02	Orthogroups_2024-Update
Glyma.01G029200	No alias	Ribosomal protein S27a / Ubiquitin family protein	0.06	Orthogroups_2024-Update
Glyma.03G197600	No alias	ubiquitin extension protein 1	0.02	Orthogroups_2024-Update
Glyma.09G023700	No alias	Ribosomal protein S27a / Ubiquitin family protein	0.04	Orthogroups_2024-Update
Glyma.15G129800	No alias	Ribosomal protein S27a / Ubiquitin family protein	0.04	Orthogroups_2024-Update
Glyma.19G195500	No alias	Ubiquitin supergroup;Ribosomal protein L40e	0.06	Orthogroups_2024-Update
HORVU1Hr1G023660.1	No alias	component *(eS31) of small ribosomal-subunit (SSU) proteome	0.04	Orthogroups_2024-Update
HORVU4Hr1G001170.5	No alias	component *(eL40) of large ribosomal-subunit (LSU) proteome	0.04	Orthogroups_2024-Update
LOC_Os05g06770	No alias	40S ribosomal protein S27a, putative, expressed	0.02	Orthogroups_2024-Update
MA_529552g0010	No alias	(at3g62250 : 229.0) ubiquitin 5 (UBQ5); FUNCTIONS IN:...	0.06	Orthogroups_2024-Update
Potri.012G024300	No alias	Ubiquitin supergroup;Ribosomal protein L40e	0.03	Orthogroups_2024-Update
Potri.014G115100	No alias	ubiquitin 6	0.02	Orthogroups_2024-Update
Potri.016G077200	No alias	ubiquitin extension protein 1	0.03	Orthogroups_2024-Update
Pp1s13_40V6	No alias	ubiquitin extension protein	0.08	Orthogroups_2024-Update
Pp1s184_64V6	No alias	ubiquitin extension protein	0.05	Orthogroups_2024-Update
Pp1s241_60V6	No alias	ubiquitin fusion protein	0.04	Orthogroups_2024-Update
Pp1s268_35V6	No alias	ubiquitin fusion protein	0.06	Orthogroups_2024-Update
Pp1s56_39V6	No alias	ubiquitin extension protein	0.05	Orthogroups_2024-Update
Pp1s56_52V6	No alias	ubiquitin extension protein	0.04	Orthogroups_2024-Update
Seita.2G133700.1	No alias	component *(eL40) of large ribosomal-subunit (LSU) proteome	0.03	Orthogroups_2024-Update
Seita.5G156000.1	No alias	component *(eS31) of small ribosomal-subunit (SSU) proteome	0.03	Orthogroups_2024-Update
Seita.7G270700.1	No alias	component *(eS31) of small ribosomal-subunit (SSU) proteome	0.04	Orthogroups_2024-Update
Seita.9G478400.1	No alias	component *(eL40) of large ribosomal-subunit (LSU) proteome	0.04	Orthogroups_2024-Update
Sobic.001G444800.1	No alias	component *(eL40) of large ribosomal-subunit (LSU) proteome	0.06	Orthogroups_2024-Update
Sobic.002G135200.1	No alias	component *(eL40) of large ribosomal-subunit (LSU) proteome	0.02	Orthogroups_2024-Update
Sobic.003G152600.1	No alias	component *(eS31) of small ribosomal-subunit (SSU) proteome	0.05	Orthogroups_2024-Update
Sobic.009G054800.1	No alias	component *(eS31) of small ribosomal-subunit (SSU) proteome	0.05	Orthogroups_2024-Update
Solyc01g056940	No alias	Ubiquitin	0.05	Orthogroups_2024-Update
Solyc01g096290	No alias	ubiquitin-ribosomal fusion protein	0.05	Orthogroups_2024-Update
Solyc08g008590	No alias	ubiquitin-ribosomal fusion protein	0.02	Orthogroups_2024-Update
Solyc08g083120	No alias	ubiquitin-ribosomal fusion protein	0.02	Orthogroups_2024-Update
Solyc12g098940	No alias	Ubiquitin, putative (AHRD V3.3 *** B9RN74_RICCO)	0.02	Orthogroups_2024-Update
Solyc12g099030	No alias	Ubiquitin, putative (AHRD V3.3 *** B9RN74_RICCO)	0.03	Orthogroups_2024-Update
Sopen01g029970	No alias	Ubiquitin family	0.07	Orthogroups_2024-Update
Sopen03g022330	No alias	Ubiquitin family	0.04	Orthogroups_2024-Update
Sopen08g004410	No alias	Ubiquitin family	0.06	Orthogroups_2024-Update
Sopen08g031340	No alias	Ubiquitin family	0.06	Orthogroups_2024-Update
Sopen11g001620	No alias	Ubiquitin family	0.02	Orthogroups_2024-Update
Sopen12g033690	No alias	Ubiquitin family	0.03	Orthogroups_2024-Update
evm.model.contig_2055.11	No alias	(at3g52590 : 241.0) Ubiquitin extension protein;...	0.05	Orthogroups_2024-Update
evm.model.contig_3445.1	No alias	no hits & (original description: no original description)	0.07	Orthogroups_2024-Update
evm.model.tig00022075.50	No alias	(at3g52590 : 236.0) Ubiquitin extension protein;...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan predictions
MF	GO:0005198	structural molecule activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	InterProScan predictions
BP	GO:0006412	translation	IEA	InterProScan predictions
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Predicted GO
MF	GO:0005048	signal sequence binding	IEP	Predicted GO
CC	GO:0005786	signal recognition particle, endoplasmic reticulum targeting	IEP	Predicted GO
BP	GO:0006605	protein targeting	IEP	Predicted GO
BP	GO:0006612	protein targeting to membrane	IEP	Predicted GO
BP	GO:0006613	cotranslational protein targeting to membrane	IEP	Predicted GO
BP	GO:0006614	SRP-dependent cotranslational protein targeting to membrane	IEP	Predicted GO
MF	GO:0008312	7S RNA binding	IEP	Predicted GO
CC	GO:0015934	large ribosomal subunit	IEP	Predicted GO
BP	GO:0016042	lipid catabolic process	IEP	Predicted GO
MF	GO:0019843	rRNA binding	IEP	Predicted GO
MF	GO:0030942	endoplasmic reticulum signal peptide binding	IEP	Predicted GO
MF	GO:0033218	amide binding	IEP	Predicted GO
BP	GO:0033365	protein localization to organelle	IEP	Predicted GO
BP	GO:0034613	cellular protein localization	IEP	Predicted GO
MF	GO:0042277	peptide binding	IEP	Predicted GO
CC	GO:0044391	ribosomal subunit	IEP	Predicted GO
BP	GO:0045047	protein targeting to ER	IEP	Predicted GO
CC	GO:0048500	signal recognition particle	IEP	Predicted GO
BP	GO:0070727	cellular macromolecule localization	IEP	Predicted GO
BP	GO:0070972	protein localization to endoplasmic reticulum	IEP	Predicted GO
BP	GO:0072594	establishment of protein localization to organelle	IEP	Predicted GO
BP	GO:0072599	establishment of protein localization to endoplasmic reticulum	IEP	Predicted GO
BP	GO:0072657	protein localization to membrane	IEP	Predicted GO
BP	GO:0090150	establishment of protein localization to membrane	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002906	Ribosomal_S27a	102	147
IPR000626	Ubiquitin_dom	3	74

External Links

No external refs found!

Kfl00144_0120 (kfl00144_0120_v1.1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation