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Aliases : kfl00164_0140_v1.1
Description : (at2g03150 : 124.0) embryo defective 1579 (emb1579); FUNCTIONS IN: binding, calcium ion binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 248.0) & (original description: no original description)
Gene families : OG_42_0005892 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005892_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Klebsormidium release: Kfl00164_0140 | |
| Cluster | HCCA clusters: Cluster_66 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 443360 | No alias | ATP/GTP-binding protein family | 0.01 | Orthogroups_2024-Update | |
| Bradi1g37780 | No alias | ATP/GTP-binding protein family | 0.02 | Orthogroups_2024-Update | |
| Bradi1g64680 | No alias | ATP/GTP-binding protein family | 0.02 | Orthogroups_2024-Update | |
| Cre06.g283634 | No alias | ATP/GTP-binding protein family | 0.01 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Predicted GO |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Predicted GO |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Predicted GO |
| MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
| MF | GO:0003688 | DNA replication origin binding | IEP | Predicted GO |
| MF | GO:0003690 | double-stranded DNA binding | IEP | Predicted GO |
| CC | GO:0005681 | spliceosomal complex | IEP | Predicted GO |
| BP | GO:0006260 | DNA replication | IEP | Predicted GO |
| BP | GO:0006487 | protein N-linked glycosylation | IEP | Predicted GO |
| BP | GO:0007165 | signal transduction | IEP | Predicted GO |
| BP | GO:0010564 | regulation of cell cycle process | IEP | Predicted GO |
| BP | GO:0010639 | negative regulation of organelle organization | IEP | Predicted GO |
| BP | GO:0010824 | regulation of centrosome duplication | IEP | Predicted GO |
| BP | GO:0010826 | negative regulation of centrosome duplication | IEP | Predicted GO |
| BP | GO:0010948 | negative regulation of cell cycle process | IEP | Predicted GO |
| MF | GO:0015631 | tubulin binding | IEP | Predicted GO |
| BP | GO:0030030 | cell projection organization | IEP | Predicted GO |
| BP | GO:0030031 | cell projection assembly | IEP | Predicted GO |
| MF | GO:0030144 | alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity | IEP | Predicted GO |
| BP | GO:0032886 | regulation of microtubule-based process | IEP | Predicted GO |
| MF | GO:0033925 | mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity | IEP | Predicted GO |
| CC | GO:0036038 | MKS complex | IEP | Predicted GO |
| MF | GO:0043015 | gamma-tubulin binding | IEP | Predicted GO |
| MF | GO:0043531 | ADP binding | IEP | Predicted GO |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Predicted GO |
| CC | GO:0044441 | ciliary part | IEP | Predicted GO |
| CC | GO:0044463 | cell projection part | IEP | Predicted GO |
| BP | GO:0044782 | cilium organization | IEP | Predicted GO |
| BP | GO:0045786 | negative regulation of cell cycle | IEP | Predicted GO |
| BP | GO:0046605 | regulation of centrosome cycle | IEP | Predicted GO |
| BP | GO:0046606 | negative regulation of centrosome cycle | IEP | Predicted GO |
| BP | GO:0051129 | negative regulation of cellular component organization | IEP | Predicted GO |
| BP | GO:0051493 | regulation of cytoskeleton organization | IEP | Predicted GO |
| BP | GO:0051494 | negative regulation of cytoskeleton organization | IEP | Predicted GO |
| BP | GO:0060271 | cilium assembly | IEP | Predicted GO |
| BP | GO:0070507 | regulation of microtubule cytoskeleton organization | IEP | Predicted GO |
| BP | GO:0070925 | organelle assembly | IEP | Predicted GO |
| BP | GO:0120031 | plasma membrane bounded cell projection assembly | IEP | Predicted GO |
| BP | GO:0120036 | plasma membrane bounded cell projection organization | IEP | Predicted GO |
| CC | GO:0120038 | plasma membrane bounded cell projection part | IEP | Predicted GO |
| MF | GO:1990837 | sequence-specific double-stranded DNA binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR025954 | DBC1/CARP1_inactive_NUDIX_dom | 491 | 608 |
| No external refs found! |