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  5. Solyc06g069860

Solyc06g069860


Description : 60S ribosomal protein L34 (AHRD V3.3 *** RL34_TOBAC)


Gene families : OG_42_0001465 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001465_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g069860
Cluster HCCA clusters: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
113433 No alias Ribosomal protein L34e superfamily protein 0.03 Orthogroups_2024-Update
A4A49_12213 No alias 60s ribosomal protein l34 0.2 Orthogroups_2024-Update
A4A49_36196 No alias 60s ribosomal protein l34 0.06 Orthogroups_2024-Update
At1g26880 No alias 60S ribosomal protein L34-1... 0.09 Orthogroups_2024-Update
Bradi3g16600 No alias Ribosomal protein L34e superfamily protein 0.2 Orthogroups_2024-Update
Bradi3g16620 No alias Ribosomal protein L34e superfamily protein 0.13 Orthogroups_2024-Update
Bradi3g37060 No alias Ribosomal protein L34e superfamily protein 0.12 Orthogroups_2024-Update
Brara.B01869.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.11 Orthogroups_2024-Update
Brara.G02472.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.29 Orthogroups_2024-Update
Brara.G02897.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.17 Orthogroups_2024-Update
Brara.I00329.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.18 Orthogroups_2024-Update
Cre16.g661050 No alias Ribosomal protein L34e superfamily protein 0.27 Orthogroups_2024-Update
Glyma.01G047000 No alias Ribosomal protein L34e superfamily protein 0.16 Orthogroups_2024-Update
Glyma.02G107100 No alias Ribosomal protein L34e superfamily protein 0.09 Orthogroups_2024-Update
Glyma.08G301300 No alias Ribosomal protein L34e superfamily protein 0.22 Orthogroups_2024-Update
Glyma.09G239000 No alias Ribosomal protein L34e superfamily protein 0.06 Orthogroups_2024-Update
Glyma.18G119100 No alias Ribosomal protein L34e superfamily protein 0.07 Orthogroups_2024-Update
HORVU2Hr1G080340.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.08 Orthogroups_2024-Update
HORVU5Hr1G066000.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.13 Orthogroups_2024-Update
HORVU7Hr1G071240.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.1 Orthogroups_2024-Update
Kfl00598_0060 kfl00598_0060_v1.1 (p40590|rl34_pea : 144.0) 60S ribosomal protein L34 -... 0.06 Orthogroups_2024-Update
LOC_Os08g33920 No alias 60S ribosomal protein L34, putative, expressed 0.07 Orthogroups_2024-Update
LOC_Os09g24690 No alias 60S ribosomal protein L34, putative, expressed 0.05 Orthogroups_2024-Update
MA_175574g0010 No alias (p41098|rl34_tobac : 177.0) 60S ribosomal protein L34 -... 0.15 Orthogroups_2024-Update
Mp4g17040.1 No alias component RPL34 of LSU proteome component 0.09 Orthogroups_2024-Update
PSME_00038465-RA No alias (p41098|rl34_tobac : 177.0) 60S ribosomal protein L34 -... 0.14 Orthogroups_2024-Update
Potri.012G108400 No alias Ribosomal protein L34e superfamily protein 0.11 Orthogroups_2024-Update
Potri.015G106500 No alias Ribosomal protein L34e superfamily protein 0.07 Orthogroups_2024-Update
Potri.017G082200 No alias Ribosomal protein L34e superfamily protein 0.17 Orthogroups_2024-Update
Pp1s200_25V6 No alias 60s ribosomal protein l34 0.04 Orthogroups_2024-Update
Pp1s39_344V6 No alias 60s ribosomal protein 0.25 Orthogroups_2024-Update
Pp1s39_364V6 No alias 60s ribosomal protein 0.03 Orthogroups_2024-Update
Pp1s57_72V6 No alias 60s ribosomal protein 0.07 Orthogroups_2024-Update
Pp1s76_47V6 No alias 60s ribosomal protein l34 0.15 Orthogroups_2024-Update
Seita.2G204000.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.2 Orthogroups_2024-Update
Seita.6G057100.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Seita.7G124100.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.21 Orthogroups_2024-Update
Sobic.007G045700.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Sopen05g003450 No alias Ribosomal protein L34e 0.29 Orthogroups_2024-Update
Sopen06g027130 No alias Ribosomal protein L34e 0.18 Orthogroups_2024-Update
evm.model.contig_445.6 No alias (p41098|rl34_tobac : 125.0) 60S ribosomal protein L34 -... 0.29 Orthogroups_2024-Update
evm.model.tig00000632.3 No alias (at1g26880 : 109.0) Ribosomal protein L34e superfamily... 0.1 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
InterPro domains Description Start Stop
IPR008195 Ribosomal_L34Ae 1 96
No external refs found!