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- Kfl00185_0100
Kfl00185_0100 (kfl00185_0100_v1.1)
Aliases : kfl00185_0100_v1.1
Description : (at4g29060 : 513.0) embryo defective 2726 (emb2726); FUNCTIONS IN: RNA binding, translation elongation factor activity; INVOLVED IN: translational elongation, response to cadmium ion, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Translation elongation factor EFTs/EF1B (InterPro:IPR001816), Translation elongation factor EFTs/EF1B, dimerisation (InterPro:IPR014039), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Translation elongation factor Ts, conserved site (InterPro:IPR018101), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: translation elongation factor Ts (EF-Ts), putative (TAIR:AT4G11120.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1026.0) & (original description: no original description)
Expression Profile
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Co-expression Networks
| Type | Description | Actions |
| Neighborhood | Klebsormidium release: Kfl00185_0100 | |
| Cluster | HCCA clusters: Cluster_57 | |
Expression Context Conservation (ECC)
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
| GRMZM2G018868 | No alias | elongation factor Ts family protein | 0.02 | Orthogroups_2024-Update | |
| Solyc07g018360 | No alias | Elongation factor Ts (AHRD V3.3 *** K4CCP7_SOLLC) | 0.02 | Orthogroups_2024-Update | |
| evm.model.contig_2612.7 | No alias | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update | |
Functional Annotation
| Type | GO Term | Name | Evidence | Source |
| MF | GO:0003674 | molecular_function | None | Extended |
| MF | GO:0003676 | nucleic acid binding | IEA | InterProScan predictions |
| MF | GO:0003723 | RNA binding | None | Extended |
| MF | GO:0003746 | translation elongation factor activity | IEA | InterProScan predictions |
| MF | GO:0005488 | binding | None | Extended |
| CC | GO:0005575 | cellular_component | None | Extended |
| CC | GO:0005576 | extracellular region | IEA | InterProScan predictions |
| BP | GO:0006414 | translational elongation | IEA | InterProScan predictions |
| BP | GO:0006807 | nitrogen compound metabolic process | None | Extended |
| BP | GO:0006810 | transport | None | Extended |
| BP | GO:0006869 | lipid transport | IEA | InterProScan predictions |
| MF | GO:0008135 | translation factor activity, RNA binding | None | Extended |
| BP | GO:0008150 | biological_process | None | Extended |
| BP | GO:0008152 | metabolic process | None | Extended |
| MF | GO:0008289 | lipid binding | IEA | InterProScan predictions |
| BP | GO:0009058 | biosynthetic process | None | Extended |
| BP | GO:0009059 | macromolecule biosynthetic process | None | Extended |
| BP | GO:0009987 | cellular process | None | Extended |
| BP | GO:0019538 | protein metabolic process | None | Extended |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | None | Extended |
| BP | GO:0042157 | lipoprotein metabolic process | IEA | InterProScan predictions |
| BP | GO:0043170 | macromolecule metabolic process | None | Extended |
| BP | GO:0044237 | cellular metabolic process | None | Extended |
| BP | GO:0044238 | primary metabolic process | None | Extended |
| BP | GO:0044249 | cellular biosynthetic process | None | Extended |
| BP | GO:0044260 | cellular macromolecule metabolic process | None | Extended |
| BP | GO:0051179 | localization | None | Extended |
| BP | GO:0051234 | establishment of localization | None | Extended |
| BP | GO:0071702 | organic substance transport | None | Extended |
| BP | GO:0071704 | organic substance metabolic process | None | Extended |
| MF | GO:0097159 | organic cyclic compound binding | None | Extended |
| MF | GO:1901363 | heterocyclic compound binding | None | Extended |
| BP | GO:1901564 | organonitrogen compound metabolic process | None | Extended |
| BP | GO:1901576 | organic substance biosynthetic process | None | Extended |
| Type | GO Term | Name | Evidence | Source |
| MF | GO:0003743 | translation initiation factor activity | IEP | Predicted GO |
| CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Predicted GO |
| BP | GO:0006081 | cellular aldehyde metabolic process | IEP | Predicted GO |
| BP | GO:0006090 | pyruvate metabolic process | IEP | Predicted GO |
| BP | GO:0006644 | phospholipid metabolic process | IEP | Predicted GO |
| BP | GO:0008654 | phospholipid biosynthetic process | IEP | Predicted GO |
| BP | GO:0009240 | isopentenyl diphosphate biosynthetic process | IEP | Predicted GO |
| MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | Predicted GO |
| MF | GO:0016726 | oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor | IEP | Predicted GO |
| BP | GO:0019288 | isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | IEP | Predicted GO |
| BP | GO:0019682 | glyceraldehyde-3-phosphate metabolic process | IEP | Predicted GO |
| MF | GO:0031072 | heat shock protein binding | IEP | Predicted GO |
| BP | GO:0046490 | isopentenyl diphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0050992 | dimethylallyl diphosphate biosynthetic process | IEP | Predicted GO |
| BP | GO:0050993 | dimethylallyl diphosphate metabolic process | IEP | Predicted GO |
| MF | GO:0051082 | unfolded protein binding | IEP | Predicted GO |
| MF | GO:0051745 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity | IEP | Predicted GO |
