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  5. Kfl00188_0010

Kfl00188_0010 (kfl00188_0010_v1.1,...)


Aliases : kfl00188_0010_v1.1, kfl00188_0010_v1.1

Description : (at5g12080 : 107.0) mechanosensitive channel of small conductance-like 10 (MSL10); FUNCTIONS IN: mechanically-gated ion channel activity; INVOLVED IN: detection of mechanical stimulus; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Membrane protein, At2g17000, predicted (InterPro:IPR016688), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920), Mechanosensitive ion channel MscS (InterPro:IPR006685); BEST Arabidopsis thaliana protein match is: mechanosensitive channel of small conductance-like 9 (TAIR:AT5G19520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 214.0) & (original description: no original description)


Gene families : OG_42_0000648 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000648_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Klebsormidium release: Kfl00188_0010
Cluster HCCA clusters: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Glyma.09G067750 No alias mechanosensitive channel of small conductance-like 10 0.02 Orthogroups_2024-Update
Glyma.20G105400 No alias mechanosensitive channel of small conductance-like 6 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003688 DNA replication origin binding IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0010564 regulation of cell cycle process IEP Predicted GO
BP GO:0010639 negative regulation of organelle organization IEP Predicted GO
BP GO:0010824 regulation of centrosome duplication IEP Predicted GO
BP GO:0010826 negative regulation of centrosome duplication IEP Predicted GO
BP GO:0010948 negative regulation of cell cycle process IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0030030 cell projection organization IEP Predicted GO
BP GO:0030031 cell projection assembly IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0032886 regulation of microtubule-based process IEP Predicted GO
BP GO:0033043 regulation of organelle organization IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
CC GO:0036038 MKS complex IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
CC GO:0044441 ciliary part IEP Predicted GO
CC GO:0044463 cell projection part IEP Predicted GO
BP GO:0044782 cilium organization IEP Predicted GO
BP GO:0045786 negative regulation of cell cycle IEP Predicted GO
BP GO:0046605 regulation of centrosome cycle IEP Predicted GO
BP GO:0046606 negative regulation of centrosome cycle IEP Predicted GO
BP GO:0048523 negative regulation of cellular process IEP Predicted GO
BP GO:0051128 regulation of cellular component organization IEP Predicted GO
BP GO:0051129 negative regulation of cellular component organization IEP Predicted GO
BP GO:0051493 regulation of cytoskeleton organization IEP Predicted GO
BP GO:0051494 negative regulation of cytoskeleton organization IEP Predicted GO
BP GO:0060271 cilium assembly IEP Predicted GO
BP GO:0070507 regulation of microtubule cytoskeleton organization IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:0120031 plasma membrane bounded cell projection assembly IEP Predicted GO
BP GO:0120036 plasma membrane bounded cell projection organization IEP Predicted GO
CC GO:0120038 plasma membrane bounded cell projection part IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1990837 sequence-specific double-stranded DNA binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!