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  5. Kfl00188_0090

Kfl00188_0090 (kfl00188_0090_v1.1)


Aliases : kfl00188_0090_v1.1

Description : (o80360|rk3_tobac : 273.0) 50S ribosomal protein L3, chloroplast precursor (Fragment) - Nicotiana tabacum (Common tobacco) & (at2g43030 : 270.0) Ribosomal protein L3 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L3 (InterPro:IPR000597), Ribosomal protein L3, bacterial/organelle-type (InterPro:IPR019927), Ribosomal protein L3, conserved site (InterPro:IPR019926), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: ribosomal protein L3 plastid (TAIR:AT3G17465.1); Has 8745 Blast hits to 8744 proteins in 2878 species: Archae - 254; Bacteria - 5494; Metazoa - 134; Fungi - 132; Plants - 92; Viruses - 0; Other Eukaryotes - 2639 (source: NCBI BLink). & (reliability: 540.0) & (original description: no original description)


Gene families : OG_42_0007933 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007933_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Klebsormidium release: Kfl00188_0090
Cluster HCCA clusters: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
430901 No alias Ribosomal protein L3 family protein 0.06 Orthogroups_2024-Update
A4A49_14193 No alias 50s ribosomal protein l3, chloroplastic 0.03 Orthogroups_2024-Update
Bradi3g03270 No alias Ribosomal protein L3 family protein 0.05 Orthogroups_2024-Update
Cre48.g761197 No alias Ribosomal protein L3 family protein 0.09 Orthogroups_2024-Update
Glyma.06G001800 No alias Ribosomal protein L3 family protein 0.02 Orthogroups_2024-Update
HORVU6Hr1G018830.4 No alias component *(uL3c) of large plastid ribosomal-subunit proteome 0.07 Orthogroups_2024-Update
MA_10432831g0010 No alias (at2g43030 : 375.0) Ribosomal protein L3 family protein;... 0.02 Orthogroups_2024-Update
Potri.013G070100 No alias Ribosomal protein L3 family protein 0.06 Orthogroups_2024-Update
Pp1s144_93V6 No alias 50s ribosomal protein l3 0.04 Orthogroups_2024-Update
Seita.1G093900.1 No alias component *(uL3c) of large plastid ribosomal-subunit proteome 0.07 Orthogroups_2024-Update
Sobic.004G034500.1 No alias component *(uL3c) of large plastid ribosomal-subunit proteome 0.03 Orthogroups_2024-Update
Solyc06g051200 No alias Ribosomal protein L3 family protein (AHRD V3.3 *** AT2G43030.1) 0.04 Orthogroups_2024-Update
Sopen06g017110 No alias Ribosomal protein L3 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004019 adenylosuccinate synthase activity IEP Predicted GO
MF GO:0004129 cytochrome-c oxidase activity IEP Predicted GO
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Predicted GO
CC GO:0005740 mitochondrial envelope IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
CC GO:0005750 mitochondrial respiratory chain complex III IEP Predicted GO
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Predicted GO
BP GO:0006163 purine nucleotide metabolic process IEP Predicted GO
BP GO:0006164 purine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
BP GO:0009165 nucleotide biosynthetic process IEP Predicted GO
MF GO:0015002 heme-copper terminal oxidase activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015078 proton transmembrane transporter activity IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Predicted GO
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031967 organelle envelope IEP Predicted GO
CC GO:0031975 envelope IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
CC GO:0045275 respiratory chain complex III IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
BP GO:0072521 purine-containing compound metabolic process IEP Predicted GO
BP GO:0072522 purine-containing compound biosynthetic process IEP Predicted GO
BP GO:0090407 organophosphate biosynthetic process IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000597 Ribosomal_L3 156 245
No external refs found!