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  5. Kfl00192_0050

Kfl00192_0050 (kfl00192_0050_v1.1)


Aliases : kfl00192_0050_v1.1

Description : (at5g14660 : 197.0) Encodes a peptide deformylase PDF1B. The crystal structure has been determined at a resolution of 0.24 nm (Biochem J, 2008, vol 413:417-427).; peptide deformylase 1B (PDF1B); FUNCTIONS IN: peptide deformylase activity; INVOLVED IN: translation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Formylmethionine deformylase (InterPro:IPR000181); BEST Arabidopsis thaliana protein match is: peptide deformylase 1A (TAIR:AT1G15390.1); Has 11057 Blast hits to 11054 proteins in 2650 species: Archae - 4; Bacteria - 7863; Metazoa - 125; Fungi - 0; Plants - 121; Viruses - 2; Other Eukaryotes - 2942 (source: NCBI BLink). & (reliability: 394.0) & (original description: no original description)


Gene families : OG_42_0006379 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006379_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Klebsormidium release: Kfl00192_0050
Cluster HCCA clusters: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
Brara.J02006.1 No alias formylmethionine deformylase *(PDF) & EC_3.5 hydrolase... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0001671 ATPase activator activity IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0010167 response to nitrate IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
BP GO:0015706 nitrate transport IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
BP GO:1901698 response to nitrogen compound IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR023635 Peptide_deformylase 64 214
No external refs found!